Name : fliP (LHK_02351) Accession : YP_002796342.1 Strain : Laribacter hongkongensis HLHK9 Genome accession: NC_012559 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 2245231 - 2245986 bp Length : 756 bp Strand : - Note : flagellar biosynthetic protein fliP; FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGAAGTCCCGTTTCCTCTTTGCCCTGCCTTGGCTGGCGATGGGCGGACTGCTGGTGGCCGATGCCGCTGCCGCACCGAA CATCCCGTTCATGAATGCCAGTCCTGCCGGCGGTGCCGGTACGCAGTACTCGCTGTCGCTCGAGATGCTGCTGTTCCTGA CCAGTCTGACCTTCATTCCGGCTCTGCTGCTGATGATGACGGCGTTTACCCGCATCGTGATCGTGCTGTCGCTGTTGCGG CAGGCGATCGGCCTGATGCAGTCGCCACCCAACCAGGTGATTGTCGGTCTGTCACTGTTCCTGACCCTGTTTGTCATGGC GCCGGTGTTCGACCAGGCCTACCGAGAAGCCTGGCTGCCGTATTCCGACAGCCAGATGAATTTCATGCAGGCGGCTGAAA AAGGCGTCCAGCCGTTCAAGGGCTTCATGCTGAAACAGACGCGGGAAAAGGACTTGGCTTTTTTTGTCGAGATTGCCCGC GAAGCGCCTCCGGCCACTCCGGCAGACGTCAGCCTGAAAACCCTGATTCCGGCCTTCGTGGTCAGTGAGCTGAAAACCGC GTTCCAGATCGGATTCATGGTGTTCATTCCGTTCCTGATCATTGACCTGGTGGTGGCCAGCGTGCTGATGGCCATGGGCA TGATGATGGTGTCGCCGGTGATCATTTCGCTGCCGTTCAAGCTGATGCTGTTTGTGCTGGTGGACGGCTGGACGTTGCTG ATCGGTTCGCTGGTCCAGAGTTTTTACCTGACATGA Protein sequence : MKSRFLFALPWLAMGGLLVADAAAAPNIPFMNASPAGGAGTQYSLSLEMLLFLTSLTFIPALLLMMTAFTRIVIVLSLLR QAIGLMQSPPNQVIVGLSLFLTLFVMAPVFDQAYREAWLPYSDSQMNFMQAAEKGVQPFKGFMLKQTREKDLAFFVEIAR EAPPATPADVSLKTLIPAFVVSELKTAFQIGFMVFIPFLIIDLVVASVLMAMGMMMVSPVIISLPFKLMLFVLVDGWTLL IGSLVQSFYLT |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 7e-35 | 46 |
hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 7e-35 | 46 |
lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 3e-35 | 46 |
hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 5e-35 | 45 |
hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 8e-35 | 45 |
hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 8e-35 | 45 |
hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 6e-35 | 45 |
hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 5e-34 | 44 |
YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 4e-33 | 44 |
hrcR | YP_198720.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 4e-34 | 44 |
hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 3e-29 | 43 |
hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 3e-29 | 43 |
hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 3e-29 | 43 |
hrcR | ABQ88359.1 | HrcR | Virulence | Hrp PAI | Protein | 3e-21 | 43 |
hrpW | AAB05075.1 | HrpW | Virulence | Hrp PAI | Protein | 3e-21 | 43 |
hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 4e-30 | 43 |
hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 6e-22 | 43 |
hrcR | NP_791222.3 | type III secretion protein HrcR | Virulence | Hrp PAI | Protein | 1e-23 | 42 |
hrcR | AAG33884.1 | HrcR | Virulence | Hrp PAI | Protein | 1e-23 | 42 |
hrcR | AAB06005.2 | HrcR | Virulence | Hrp PAI | Protein | 1e-29 | 42 |
hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 7e-22 | 42 |
ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 3e-34 | 42 |
ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 3e-34 | 42 |
ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 2e-34 | 42 |
yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 1e-33 | 42 |
yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 1e-33 | 42 |
escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 5e-33 | 42 |
escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 5e-33 | 42 |
ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 3e-33 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
fliP | YP_002796342.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 2e-65 | 67 |
fliP | YP_002796342.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 4e-59 | 66 |
fliP | YP_002796342.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 1e-57 | 58 |
fliP | YP_002796342.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 1e-53 | 53 |
fliP | YP_002796342.1 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 2e-36 | 45 |
fliP | YP_002796342.1 | flagellar biosynthesis protein FliP | VFG0044 | Protein | 2e-35 | 44 |
fliP | YP_002796342.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 1e-34 | 44 |
fliP | YP_002796342.1 | flagellar biosynthesis protein FliP | VFG0519 | Protein | 1e-34 | 42 |