Gene Information

Name : LHK_02195 (LHK_02195)
Accession : YP_002796188.1
Strain : Laribacter hongkongensis HLHK9
Genome accession: NC_012559
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 2084115 - 2084816 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence : 
ATGATCGCCTCCGAAAACCGTTCCGTCATTCTGCAAGCCCGCGACCTGTCACGACAAGTCGTGTTTGGCGGCCAGCCGCT
GGTCATCCTTGCCGGCATCAACCTGACCCTGCACGCCGGAGACACGCTGGCCATCGTCGGCCGTTCCGGCTCGGGCAAAT
CCACCCTTCTCGGCCTGCTGGCCGGGCTGGACCTGCCAAGCCACGGTGACGTGCTGCTGGCCGGACAATCGCTGGCGGCC
CTCGACGAGGACGGCCGCGCCCGCCTGCGCCAGCAGCAGATCGGCTTCGTGTTCCAGAATTTCCAGCTGCTGCCGGCGCT
GTCGGCACTGGAAAACGTCATGCTGCCGCTGGAGCTGGCCGGCACATCCGATGCCCGGGCGCGGGCTGTGGCCATGCTGG
AGCGGGTCGGCCTGGCCGACCGGCTGGCACACCGGCCGCAGGAACTGTCCGGTGGCGAACAGCAGCGCGTGGCAGTGGCC
CGTGCCTTTGTCTCCCGGCCGGCCTTGCTGCTGGCCGACGAACCGACCGGCAACCTCGACGGCGACACCGGCCTCCTCGT
GGCTGACCTGCTGTTTGAACTCAACCGCGAACAGGGCACGACGCTGGTGCTGGTCACCCACGACACCGAGCTGGCACGCC
GCTGTTCGCACCAGGTACGACTGGCCGGTGGCCGGCTGGTGGAGAAGGAGCAGTCAGCATGA

Protein sequence : 
MIASENRSVILQARDLSRQVVFGGQPLVILAGINLTLHAGDTLAIVGRSGSGKSTLLGLLAGLDLPSHGDVLLAGQSLAA
LDEDGRARLRQQQIGFVFQNFQLLPALSALENVMLPLELAGTSDARARAVAMLERVGLADRLAHRPQELSGGEQQRVAVA
RAFVSRPALLLADEPTGNLDGDTGLLVADLLFELNREQGTTLVLVTHDTELARRCSHQVRLAGGRLVEKEQSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-21 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-21 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-21 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-21 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LHK_02195 YP_002796188.1 ABC transporter NC_012469.1.7686878. Protein 1e-32 50
LHK_02195 YP_002796188.1 ABC transporter NC_008702.1.4606598. Protein 7e-30 47