Gene Information

Name : LHK_00204 (LHK_00204)
Accession : YP_002794209.1
Strain : Laribacter hongkongensis HLHK9
Genome accession: NC_012559
Putative virulence/resistance : Virulence
Product : Response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 194991 - 195668 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence : 
ATGACCACCACTCTTCAGACTGAATGCCTGCCCGTCGCCCACATCGTGGACGACGACGAGCCGTTCCGGCAGTCACTGAC
GTTTCTGCTGGAATCCTCCGGCTGGTCCACCGTCGAATACGATTCGGCCGCCGCCTTCCTCGCGGCCGATCCGCCCTATC
CGGGCGCCGGCTGCCTGATCCTCGACATCCGCATGCCGCGCATGAACGGACTGGAGCTTTACCAGGAGCTGGTCCGGCGC
GGCTCGACCTTTCCGGTCCTGTTCATGACCGGGCACGGTGACGTTGAACTGGCCGTTGAAGCCATGAAGGCCGGCGCTAC
GGATTTCCTGCAAAAACCGTTTCGCGAACAGCAATTGCTGACCGCGCTGGAATCAGCCCACCGTCACGGCCAGATGCGCC
AGCGGCTGCGTGACAGCCGGCAGCAGGCACAGGACCGGCTGGACCGGCTGACACCGCGTGAATACGAAATCGCCTGTCTG
GCAGCCGCCGGCCATCCGAACAAGCGCATCGCCGCCCAGCTCGGCATCAGCGAAAAAACCGTGCATTCTCACCGGCTGAA
CCTGATGGACAAGACCGGGGCCGGCAATCTGGCCGACCTCGTGCGGCTGGTGATGAGCGCCGCTCCGGAGGCGCTCTCCC
GGCAGGCCGAAGCCGGTCAGCCGCTTCAGTTGGGCTGA

Protein sequence : 
MTTTLQTECLPVAHIVDDDEPFRQSLTFLLESSGWSTVEYDSAAAFLAADPPYPGAGCLILDIRMPRMNGLELYQELVRR
GSTFPVLFMTGHGDVELAVEAMKAGATDFLQKPFREQQLLTALESAHRHGQMRQRLRDSRQQAQDRLDRLTPREYEIACL
AAAGHPNKRIAAQLGISEKTVHSHRLNLMDKTGAGNLADLVRLVMSAAPEALSRQAEAGQPLQLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 2e-24 41
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 2e-24 41
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 1e-24 41
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 2e-24 41
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 2e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LHK_00204 YP_002794209.1 Response regulator VFG0488 Protein 6e-25 41