Gene Information

Name : glnA (LHK_01876)
Accession : YP_002795869.1
Strain : Laribacter hongkongensis HLHK9
Genome accession: NC_012559
Putative virulence/resistance : Virulence
Product : GlnA
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1780354 - 1781775 bp
Length : 1422 bp
Strand : +
Note : Glutamine synthetase

DNA sequence :
ATGGCGGCTGTCGCTAACGTAAAGAAACTGATTGAAGACAACGACGTCAAATTCGTTGATCTGCGTTTTACCGACACCAA
GGGCAAGGAACAGCACGTCACGGTGCCGGCCCATGTGGTGACCGAAGACATCGAAAGCTGGTTTGAGCACGGCCACGCAT
TTGACGGTTCCTCCATCGCTGGCTGGAAGGGCATCCAGGCTTCCGACATGCTGCTGATCGCTGATCCGGCCACGGCCAAC
ATTGATCCGTTCTTCGACGAACCGACCCTGTTCATGTCCTGCGATGTGGTGGATCCGGCCGACGGCAAGGGCTATGACCG
CTGCCCGCGCTCGATCGCCAAGCGCGCTGAAGCCTACCTGAAGGCCTCGGGCATCGGTGATGTCGCCTACTTTGGTCCGG
AGCCCGAATTCTTCGTGTTCGACAGCATCACCTGGCACGCCGACATGTCCGGCTGCCACGTCAAGATCAACTCCGAAGAA
GCCGCATGGTCCTCCGCTGACCCGATGAACGGTGCCAACACCGGCCATCGTCCGCGCGTCAAGGGCGGCTACTTCCCGGT
TCCGCCGGTCGACAGCTTCCAGGACATGCGCTCGCAAATGGTCCTGCTGATGGAAGAGCTCGGCGTGCCGGTCGAAGTGC
ACCACCACGAAGTAGCCACCGCCGGCCAGATGGAAATCGGCACCCGCTTCAGCACCCTGACCCAGCGTGCCGACTGGACC
CAGATCATGAAATACGTGATCCAGAACGTCGCCCACAGCTACGGCAAGACCGCCACCTTCATGCCCAAGCCGATCTGTGG
CGACAACGGCAGCGGCATGCACGTGCACCAGTCGATCTGGAAAGACGGCGTGAACCTGTTTGCAGGTGACGGCTACGCCG
GCCTGTCCGAGTTCGCCCTCTACTACATCGGCGGCATCATCAAGCACGCCAAGGCCCTGAATGCCATCACCAATCCGGGC
ACCAACTCCTACAAGCGCCTGGTTCCGCACTACGAAGCCCCGGTGAAGCTGGCCTACTCGGCCAAGAACCGCTCGGCCTC
GATCCGCATTCCGCACGTAGCCAGCCCGAAGGCCCGCCGCATCGAAGCCCGCTTCCCGGATCCTTCCGCCAACCCGTACC
TGTGCTTCGCTGCACTGATGATGGCCGGTCTGGACGGTGTGCAGAACAAGATCCACCCGGGCGAACCGGCCAGCAAGAAC
CTCTACGACCTGCCGCCGGAAGAGGACAAGCTAATCCCGACCGTCTGCGCCTCGCTCGAAGAAGCCTTGGCTTCGCTGAA
TGCAGACCGCGAGTTCCTGACCCGCGGCGGCGTGTTCAGCAACGAATGGATTGATGCCTTCATCGACCTCAAGATGCAGG
AAGTCAGCCGTATCCGCATGACTCCGCACCCGGTCGAATTCGACGAGTACTACAGCCTGTAA

Protein sequence :
MAAVANVKKLIEDNDVKFVDLRFTDTKGKEQHVTVPAHVVTEDIESWFEHGHAFDGSSIAGWKGIQASDMLLIADPATAN
IDPFFDEPTLFMSCDVVDPADGKGYDRCPRSIAKRAEAYLKASGIGDVAYFGPEPEFFVFDSITWHADMSGCHVKINSEE
AAWSSADPMNGANTGHRPRVKGGYFPVPPVDSFQDMRSQMVLLMEELGVPVEVHHHEVATAGQMEIGTRFSTLTQRADWT
QIMKYVIQNVAHSYGKTATFMPKPICGDNGSGMHVHQSIWKDGVNLFAGDGYAGLSEFALYYIGGIIKHAKALNAITNPG
TNSYKRLVPHYEAPVKLAYSAKNRSASIRIPHVASPKARRIEARFPDPSANPYLCFAALMMAGLDGVQNKIHPGEPASKN
LYDLPPEEDKLIPTVCASLEEALASLNADREFLTRGGVFSNEWIDAFIDLKMQEVSRIRMTPHPVEFDEYYSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 5e-96 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_002795869.1 GlnA VFG1399 Protein 3e-99 49