Gene Information

Name : atkC (LHK_01574)
Accession : YP_002795571.1
Strain : Laribacter hongkongensis HLHK9
Genome accession: NC_012559
Putative virulence/resistance : Unknown
Product : AtkC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2156
EC number : 3.6.3.12
Position : 1521757 - 1522413 bp
Length : 657 bp
Strand : +
Note : Potassium-transporting ATPase C chain

DNA sequence :
ATGAAACTGACTTCTACCCTGAATGCTGCCGGGCTGACGACCGGGCAAGCCACCTCCGTGCGAGTAGCGGGCGCGACCAC
CTCCTGCCGTGGCCTGCTGCGCCCGGCGCTGACCCTGCTGGTGCTGCTGTCGGCGCTGACCGGGCTGGCCTATCCCGCCC
TGATCACCGGGCTGGCACAGACCCTGTTTCCCTTTCAGGCCAACGGCAGTCTGGTGCGCGATGGTGAACGGGTGGTCGGC
AGTGTGCTGATCGGCCAGTCGTTTACGGCAGCACATTACTTCCACGGCCGGCCATCGGCGACGGCCGAGCGTCCTTACAA
TGCCATGGCCTCGGGGGGCAGCAATCTGGGCCCGGCCAATCCGGAACTGGTCAGGCAGGTGCGCGAACGGATCGCGGCAC
TGGCGCCAGTGCCTGCCGGCCAGACAGTGCCGCTGGATCTGGTGACCAGTTCGGCCAGCGGGCTGGACCCGGACATTTCG
CCGGCCGCGGCGTTCTACCAGGTGGCGCGGGTGGCCCGGGCGCGTGGCTTGCCCGAGGAGGCCGTGGCGCAGCGGGTGCA
GGATTTGATCCAGCCGCCGCAATGGGGCATGTTTGGCGAGCCGCGCGTCAATGTGCTGCAACTCAACCGCCAGCTTGACC
AGTTGGCGAGCCGTTAA

Protein sequence :
MKLTSTLNAAGLTTGQATSVRVAGATTSCRGLLRPALTLLVLLSALTGLAYPALITGLAQTLFPFQANGSLVRDGERVVG
SVLIGQSFTAAHYFHGRPSATAERPYNAMASGGSNLGPANPELVRQVRERIAALAPVPAGQTVPLDLVTSSASGLDPDIS
PAAAFYQVARVARARGLPEEAVAQRVQDLIQPPQWGMFGEPRVNVLQLNRQLDQLASR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0089 AAM75292.1 EF0089 Not tested Not named Protein 8e-21 43
kdpC NP_814335.1 potassium-transporting ATPase subunit C Not tested Not named Protein 1e-20 43
kdpC(SCCmec) NP_370598.1 potassium-transporting ATPase subunit C Not tested Type-II SCCmec Protein 7e-21 42
kdpC YP_190028.1 potassium-transporting ATPase subunit C Not tested Type-II SCCmec Protein 9e-21 42
kdpC YP_251950.1 potassium-transporting ATPase subunit C Not tested SCCmec Protein 7e-20 42