Gene Information

Name : LHK_01534 (LHK_01534)
Accession : YP_002795532.1
Strain : Laribacter hongkongensis HLHK9
Genome accession: NC_012559
Putative virulence/resistance : Unknown
Product : Integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 1481849 - 1483099 bp
Length : 1251 bp
Strand : -
Note : -

DNA sequence : 
GTGGCAGTACTGACGGACAGACAGGCGGCAAACATCAGGCCGACTGACAAGGCAAAGGCTCATGGCGGTGTGGTTGGACT
GTGGCTGATACCACTCAAGGAAAAGGGTACGGGCAGATGGATATTCCGGTTCACCTCGCCCACCTCGAAAAAGCGGCGAG
ACCTCGGACTGGGCAAATACCCGGCCATCACGATCAAACAGGCAGGAGAGCTTGGCGAGGCTGCCCGGTTGCTGGTGCTA
CAGGGCATTGACCCCATTGACCACAAACGGGAGCAGGAAGCCGCTGCCGAGGCTGCCAACGAGCGCATCACGTTTGAGCA
GGCCGCTATCCATACCCATGAAACGCTGTCGCCCGGCTGGTCGAACCGGCACGCCAGCGCAGACTGGATCAACTCGCTAC
GCCGTCACGTCTTCCCGAAGATCGGGGACAAACCCGTCGCTGATCTGGTTAGGCGCGACTTTGCTGCCGTGCTGCTGCCA
ATCTGGCTGGTGCTGCCTGAAACCGCTGCCCGTGTGCGCCAGCGCATGCAAACCGTAATGGAATGGTGTCTGGCCCGCGA
CCTGATCGCCGCCAATCAATGCGATAGCGCCCTGAGCCGGCTGCTGCCCAAGCAACCGAGCAAGGCCGAGCGGGAAGAGC
ATCACCCGGCAATGCCGTGGCGCTTGCTACCCGCCTTTGTGGCTGCGCACCTTGGCGAAGGCAGGCCAGTCAGCGTCGCA
CGGCCAATGCTGGAATTTCTGATCCTCACGGCTGCCCGGTCTGGTGAGGTGCGCGGCATGGTATGGGATGAGGTCGATCT
TTCAGCCAAAGTCTGGACGATTCCGGGCGAACGGATGAAGGCAGGCGCGACCCATCAAGTGCCGTTGTCTGATCGTGCCA
TGGCTATCCTGCGCCAGCAGCGCGAACGGCACCCGTTTTCTGCGATGGTATTCCCCCCGAACCGGGGCCGCGTGGTCTCT
GACATGACGCTGACCAGATACTTGCATGAGGTGGATGCACCCAGCGATACCGAAGGCCGCCATGCAACCGTCCACGGCTT
TCGCAGCACATTCAAGGATTGGGCGATCGAACACGGCTATCCGGGCGAGCTATCTGAAAAGGCGCTGGCGCACATGATCA
AAAACAAGGTAGAGGCTGCCTATCATCGCTCCAGCCAACTGGAGCAGCGCCGCGCACTGATGCAGGCATGGGCGGATTAC
GTGGAAAGCGGACGAGCTGGCGGGATAACCAACATTCGCATGATTGCCTGA

Protein sequence : 
MAVLTDRQAANIRPTDKAKAHGGVVGLWLIPLKEKGTGRWIFRFTSPTSKKRRDLGLGKYPAITIKQAGELGEAARLLVL
QGIDPIDHKREQEAAAEAANERITFEQAAIHTHETLSPGWSNRHASADWINSLRRHVFPKIGDKPVADLVRRDFAAVLLP
IWLVLPETAARVRQRMQTVMEWCLARDLIAANQCDSALSRLLPKQPSKAEREEHHPAMPWRLLPAFVAAHLGEGRPVSVA
RPMLEFLILTAARSGEVRGMVWDEVDLSAKVWTIPGERMKAGATHQVPLSDRAMAILRQQRERHPFSAMVFPPNRGRVVS
DMTLTRYLHEVDAPSDTEGRHATVHGFRSTFKDWAIEHGYPGELSEKALAHMIKNKVEAAYHRSSQLEQRRALMQAWADY
VESGRAGGITNIRMIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1120 NP_286655.1 P4 family integrase Not tested TAI Protein 9e-87 48
Z1559 NP_287063.1 P4 family integrase Not tested TAI Protein 9e-87 48
int AAL08426.1 integrase Not tested SRL Protein 1e-86 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LHK_01534 YP_002795532.1 Integrase VFG0672 Protein 8e-87 48