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Name : hsdM-1 (LHK_01516) Accession : YP_002795514.1 Strain : Laribacter hongkongensis HLHK9 Genome accession: NC_012559 Putative virulence/resistance : Unknown Product : HsdM Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : 2.1.1.72 Position : 1466252 - 1468093 bp Length : 1842 bp Strand : + Note : type I restriction-modification methylase DNA sequence : ATGAATCCCTCCGCACTGTCCGCCTTTATCTGGTCGGTCGCCGACCTCTTGCGCGGCGACTACAAGCAAAGCGAATACGG CAAAGTCATCCTGCCATTCACCGTCCTGCGCCGCCTCGACTGCGTGCTCGCCGACACCAAACCGGCGGTGCTCGCCGAAC TTCAATTGCGCAGCGATGCCGGCGTCAACCCCGAGCCCTTCCTGCTGCGCAAGGCCGGCCAGAGCTTCTACAACACCTCG CCGCTCGACCTCTCCAAGCTGTTAGGCGACCAGGACCATATCCGCGAGAACCTGTACGCCTACATTCAGGGCTTCTCGCC CGCCGCGCGTGACATCTTCGAGCGCTTCGATTTCTTCACCCAGGTCGAGCGCCTAGCCAAGGCAGGCCTGTTGTATCTGG TGACCGAGAAGTTCGCCAACATCGACCTGCACCCGGCGTCGGTCGACAACGCCAGCATGGGCCTGGTGTTTGAGGAGTTG ATTCGCAAGTTTGCCGAAATCTCCAACGAGACGGCGGGGGAGCACTTCACCCCGCGCGAAGTCATCCGCCTGATGGTCAA CCTGCTGTTCATCGAGGACGACGACGTGCTGACCGCCGGCAACGCGGTGGTACGTACGCTGTACGACCCGACCGCGGGCA CCGGCGGCATGTTGTCGGTGGCCGGCGAATTCCTCGCCGAGCACAACCCGCAGGCGCGCCTCACCCTGTTCGGCCAGGAG CTGAACGACGAGTCCTACGCCATCTGCAAGGCGGACATGCTTATCAAGGGGCAGGACGTCGGCAACATCGTCGCCGGCAA CACGCTATCCGACGACGGCCACGGCGCGCGCAAGTTCGACTACATGCTGTCCAACCCGCCGTTCGGCGTCGAGTGGAAGA AGGTCGAGAAGGCGGTGCGCGACGAGCACGAGCGCAAGGGCTTCGACGGCCGCTTCGGCCCCGGACTGCCGCGCGTCTCC GACGGCTCGATGCTGTTCCTGATGCACCTGCTCAGCAAGATGCGCCCGGCCAGCGAGGGCGGCTGCCGCTTCGGCATCGT GCTCAACGGCTCGCCGCTGTTTACCGGCGGCGCCGGCAGCGGCGAGAGCGAAATCCGCCGCTACGTGCTGGAGAACGACC TGGTCGAGGCCATCATCGGCCTGCCGACCGACATGTTCTACAACACCGGCATCGCCACCTATATCTGGGTGCTGTCCAAC AAGAAGCCGGCCGACCGCGCGGGCCAGGTCCAGCTCATCGACGCCGGCAGCTTTTGGCAGAAGATGCGCAAGAGCCTGGG CAGCAAGCGCAAGGAGATGAGCGACGAGCACATCGCCACCGTCACCCGCCTGTTCGGCGACTTCACCGAGGCAGAAATGG TCACCGTGCTGGACGCCGCAGGCGTGCCGCAGGGCGAACCCGTGCTGGTCACCAGCACCGACCCACAGCCGGTGGCGCCC GAAGGCGGCCGCCTGAAACGCGTGCCGATTGCCCGCATCTTCGACAACGCCGATTTCGGCTACACCACTATCACGGTCGA ACGCCCGCAGCGCGACGAGGCCGGCAACGTGGTGCTGGGCGTCAAGGGCAAGCAAAAGGGCAAGCCGCAGCCCGACACCA GCCTGCGCGACACCGAAAACGTGCCGCTGAAGGACGACATCGACGCCTATTTCCAGCGCGAGGTGCTGCCGCACGCGCCG GACGCGTGGATAGACCCCGACAAGACCAAGGTCGGCTACGAAATCCCGTTCAACCGCCACTTCTACGTGTTCGAGCCGCC GCGCAGCCTCGCCACCATCGACGAAGAGCTAAAGGCCGTCTCCGCCCGCATCATGGCCATGCTCGGGGAGTTGGCGGAAT GA Protein sequence : MNPSALSAFIWSVADLLRGDYKQSEYGKVILPFTVLRRLDCVLADTKPAVLAELQLRSDAGVNPEPFLLRKAGQSFYNTS PLDLSKLLGDQDHIRENLYAYIQGFSPAARDIFERFDFFTQVERLAKAGLLYLVTEKFANIDLHPASVDNASMGLVFEEL IRKFAEISNETAGEHFTPREVIRLMVNLLFIEDDDVLTAGNAVVRTLYDPTAGTGGMLSVAGEFLAEHNPQARLTLFGQE LNDESYAICKADMLIKGQDVGNIVAGNTLSDDGHGARKFDYMLSNPPFGVEWKKVEKAVRDEHERKGFDGRFGPGLPRVS DGSMLFLMHLLSKMRPASEGGCRFGIVLNGSPLFTGGAGSGESEIRRYVLENDLVEAIIGLPTDMFYNTGIATYIWVLSN KKPADRAGQVQLIDAGSFWQKMRKSLGSKRKEMSDEHIATVTRLFGDFTEAEMVTVLDAAGVPQGEPVLVTSTDPQPVAP EGGRLKRVPIARIFDNADFGYTTITVERPQRDEAGNVVLGVKGKQKGKPQPDTSLRDTENVPLKDDIDAYFQREVLPHAP DAWIDPDKTKVGYEIPFNRHFYVFEPPRSLATIDEELKAVSARIMAMLGELAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAS0027 | YP_042160.1 | type I restriction enzyme methylase | Not tested | SCC476 | Protein | 2e-117 | 44 |
