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Name : kpsD (LHK_01270) Accession : YP_002795269.1 Strain : Laribacter hongkongensis HLHK9 Genome accession: NC_012559 Putative virulence/resistance : Virulence Product : KpsD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1596 EC number : - Position : 1232639 - 1234282 bp Length : 1644 bp Strand : + Note : Polysialic acid transport protein kpsD precursor DNA sequence : ATGGTTTCTAGCGTGTTTATCCGTTTTTTCTTTCTTCGTTTGCGTGGCTGCGGGCCGGTTCTGGCCGGGTTGGTGCTGTG TGGCCTGCTCGGCAGCCTGCCGGTGCAGGCGGAAGATGCCGCCAGACCGGTTGCGGGCAAACCGGTGGCTGACAGCGTGG GCAGCCGCATGTTCGGCACCCAGCTGTTCGGGGGGGCGTTTGCCAAAATGGCCGGCGGCGGCATTCCGCAGGCGTACGTG CTGAACACGGGTGACCGGATCAAGCTCAAGCTGTGGGGCAGCATGGAGTTTGACGACACCCTGACGGTGGACGCCGACGG CCAGGTGGTGGTGCCGGGGGTGGGGGCCGTCAAGCTTGCCGGTGTGCGGCATGACCGGCTGAACGCAACGGTCAGCAGTG CGGTCAGGAAGCTGGCAGGGCGCGAGGTACAGAGTGCGGCGCAACTGGATGCCAGCCAGCCGGTCAAGGTGTTCGTCACC GGCTTTGTGCGCCAGCCAGGCCTGTACGGTGGTGTGGCGGCCGACAGCGTGCTGGCGTTTCTGGACCGGGCCGGGGGGGT GGATGCCGAGCGCGGCAGCTATATCGACATCGTGCTCAAGCGCGGAGATGCGGTGTACCGCCGCATCAACCTGTACGACT TCCTGCTGCGGGGCAACATCGATTTCTTTCCGCTGGCCGATGGCGACGCGATTGTCGTCGGTGCCCGCCGGCATACCTTC AGCGTGCGCGGCGAGGTGCTCAATCCGTTTGATTTCGAGTTCGACCAGCCGATCGTGTCGTTGACCGATGCGCTGGCGCT GGCGCATCCGCGTCCGGGCGCCACCCATGTCAGCGTGCTGCGCAGCCAGGGCACCCGGCAGATGAGCGAGTATTACCCGC TGGCCGAGGCGCGCAAGGAAGTGATGCTGTATGACGGTGACCAGCTCAACGTGACGGCAGACCGCTATGCCGGCACGATC CAGGTACGTATCGAAGGCGCCCATTCGGGCGAGCATGCGCTGGTGCTGCCGTATGGCGCGACCATGGGCGAGGTGCTGGA CCACATCAATGCCAATTCGATGTCGCGGCTGGACCAGCTCCAGCTTTACCGCAAGTCCGTGGCCGAGCGCCAGCGCGAGA TGCTCAACATTTCGTTGCAGAAATTGCAGGAAACAGCCTTGTCGGCCCGCTCCAGTACCAGTGAGGAAGCCAGCCTGCGT ACGCAGGAAGCGGCGCTGATTGCCAAGTTTGTCGAGCAGGCGCGCAAGGTCGAGCCCAAGGGGCAGGTGGTGTTGAACGA GAAAACCGCCAAGACCATGCTGCTGGAAGACGGCGACATCATCCGCATTCCGCGCAAGACCAGCGTGGTGATGGTGCATG GCGAAGTGCTGTTCCCGGCTGCCGTCAGCTGGGAATCCGGCTTGCGCGCCCGTGATTACATCGACCTTGTCGGCGGCTAT ACGCAAAGTTCGGACACCAGCAAGGTCGTGTTGATCCGCCCCAATGGCGAGGCGATCCAGGCCAGCGGCCGGACCAAGAT CGAGGCGGGTGACGAGGTGATGGTGTTGCCGAAGGTGGAGAGCAAGAACATTGAAGTGACCCGCGGCATCAGCCAGATCC TGTACCAGATCGCGGTGGCGGCCAAGGTCATCCTGGACCTGTGA Protein sequence : MVSSVFIRFFFLRLRGCGPVLAGLVLCGLLGSLPVQAEDAARPVAGKPVADSVGSRMFGTQLFGGAFAKMAGGGIPQAYV LNTGDRIKLKLWGSMEFDDTLTVDADGQVVVPGVGAVKLAGVRHDRLNATVSSAVRKLAGREVQSAAQLDASQPVKVFVT GFVRQPGLYGGVAADSVLAFLDRAGGVDAERGSYIDIVLKRGDAVYRRINLYDFLLRGNIDFFPLADGDAIVVGARRHTF SVRGEVLNPFDFEFDQPIVSLTDALALAHPRPGATHVSVLRSQGTRQMSEYYPLAEARKEVMLYDGDQLNVTADRYAGTI QVRIEGAHSGEHALVLPYGATMGEVLDHINANSMSRLDQLQLYRKSVAERQREMLNISLQKLQETALSARSSTSEEASLR TQEAALIAKFVEQARKVEPKGQVVLNEKTAKTMLLEDGDIIRIPRKTSVVMVHGEVLFPAAVSWESGLRARDYIDLVGGY TQSSDTSKVVLIRPNGEAIQASGRTKIEAGDEVMVLPKVESKNIEVTRGISQILYQIAVAAKVILDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsD | YP_854331.1 | polysialic acid transport protein KpsD precursor | Not tested | PAI I APEC-O1 | Protein | 8e-144 | 59 |
| kpsD | AAZ04468.1 | polysialic acid transport protein precursor | Virulence | PAI I APEC-O1 | Protein | 6e-144 | 59 |
| kpsD | CAE85212.1 | KpsD protein | Virulence | PAI V 536 | Protein | 2e-144 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| kpsD | YP_002795269.1 | KpsD | VFG1448 | Protein | 3e-144 | 59 |
