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Name : adi (LHK_01034) Accession : YP_002795035.1 Strain : Laribacter hongkongensis HLHK9 Genome accession: NC_012559 Putative virulence/resistance : Virulence Product : Adi Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.19 Position : 998678 - 1000933 bp Length : 2256 bp Strand : - Note : Arginine decarboxylase DNA sequence : ATGCGCTTTCGCTTTCCCATCGTCATCATTGACGAGGACTTCCGCTCCGAAAATACCAGCGGCTCCGGCATCCGCGAGCT CGCCTCCGCCATCGAGGGGCATGGCATGGAAGTCATCGGCTACACCAGCTATGGCGATCTGACTGCTTTCGCCCAGCAAC AAAGCCGGGCGGCCGGTTTCATCCTGTCGATCGATGACGAAGAATTCCACACTGCGGACAGTACCGACGCCGCCTTGGGC AAACTGTACGGTTTCGTGGCCGAAATCCGCCGCCGCAACCCGGACATCCCGGTGTACCTGTACGGCGAAACGCGCACCGC ACGCCACATCCCCAACGACATCCTGCGCGAGCTGCACGGCTTCATCCACATGCACGAGGACACGCCGGACTTCGTCGCCC GCCACATCATCCGCGAGACCAAGTCCTACCTCGACACGCTGGCACCGCCGTTCTTCCGCGCGCTGGTCGATTACGCCAAC GACGGCTCCTACTCGTGGCACTGCCCGGGGCACTCGGGTGGCGTGGCATTCCTCAAGAGCCCGGTCGGCCAGATGTTCCA CCAGTTTTTCGGTGAAAACATGCTGCGCGCCGACGTGTGCAATGCGGTGGACGAGCTGGGCCAGCTGCTGGACCACACCG GCCCGGTGGCGGCCAGCGAGCGCAACGCCGCGCGCATTTTCAGCTGCGACCACCTGTTCTTTGTCACCAACGGCACCTCG ACCAGCAACAAGATCGTCTGGCACAGCACCGTGGCCGCCGGCGACATCGTGCTGGTCGACCGCAACTGCCACAAATCGAA CCTGCACGCGATCATGATGACCGGCGCGATTCCGGTGTTCCTGATGCCGACGCGCAACCACTACGGCATCATCGGCCCGA TTCCCAAGAGTGAATTCGCGCTCGACAACATCCGCAGGAAGATCGAGGCCAACCCGTTCGCCCGTGAGGCACTGGCAAAA AATCCTGACGCCAAGCCGCGCATCCTGACGCTGACGCAGTCGACCTACGACGGCATCCTTTACAACGTCGAAGAGATCAA GGGCCTGCTCGACGGCGAAGTCGACACCCTGCACTTTGACGAAGCCTGGCTGCCGCACGCCAGCTTCCACGACTTCTACG GCGACTTCCACGCCATCGGCGAAGACCGTCCGCGCTGCAAGGAGTCGATGATTTTCTCGACCCAGTCGACCCACAAGCTG CTGGCCGGCCTGTCGCAGGCGTCGCAGATCCTGGTACAGGATCCGGAAAACCGGCAGCTGGATGTGCCGTCCTTCAACGA GGCGTACCTGATGCACACCTCGACCAGCCCGCAGTACGCCATCATCGCCAGCTGCGACGTCGCTGCCGCGATGATGGAAC AGCCGGGCGGGCAGGCGCTGGTAGAAGAATCACTGGTCGAGGCACTGGATTTCCGTCGTGCCATGCGCAAGGTGGACGAA GAATACGGTCGCGACTGGTGGTTCCGCGTCTGGGGCCCGGAAGAGCTGTCCGACGACGGTATCTGCGACCCGGCCGACTG GCAGCTCAAGCCCGAAGACCGCTGGCACGGTTTTGCCGGCATCGAGGAAGGCTTCAACCTGCTCGACCCGATCAAGGCCA CCCTGCTGACCCCGGGGCTGGACGTGGACGGCAGCTTTGAAGAGATGGGCATTCCGGCCGCCATCGTCACCAAATACCTG ACCGAACACGGTGTGGTGGTGGAAAAGACCGGCCTCTACAGCTTCTTCATCATGTTCACCATCGGCATCACCAAGGGCCG CTGGAACACGCTGATCTCGCTGTTGCAGCAGTTCAAGGACGATTTCGACAAGAACCAGCCGATGTGGCGGATCATGCCCG AGTTCGTTGCCCGGCATCCGCAGTACGAACGGGTCGGCCTGCGCGACCTGTGCCAGAAGATCCACCAGCTCTATGCACGT CACGACATCGCCCGCCTGACGACCGAGATCTACCTGTCGGAAATGGAGCCGGCGATGAAACCGTCGGAGGCCTTTGCCAA AACGGCACACCGCGAAATCGAGCGCGTGCCGGTGGACGAGCTGCTGGGCCGTGTGACTGCCGTGCTGCTGACGCCGTATC CGCCGGGCATTCCGCTCCTGATCCCGGGCGAGCGCTTCAACCGCACCATCGTCGACTACCTGAAGTTCGTGCAGGACTTC AACCGCGAGCTGCCGGGCTTTGAAACCGACGTGCACGGTCTGGTTGCCACCGAGCGTGACGGACGCAAGGTGTACTGCGT CGACTGCGTGTACTGA Protein sequence : MRFRFPIVIIDEDFRSENTSGSGIRELASAIEGHGMEVIGYTSYGDLTAFAQQQSRAAGFILSIDDEEFHTADSTDAALG KLYGFVAEIRRRNPDIPVYLYGETRTARHIPNDILRELHGFIHMHEDTPDFVARHIIRETKSYLDTLAPPFFRALVDYAN DGSYSWHCPGHSGGVAFLKSPVGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFSCDHLFFVTNGTS TSNKIVWHSTVAAGDIVLVDRNCHKSNLHAIMMTGAIPVFLMPTRNHYGIIGPIPKSEFALDNIRRKIEANPFAREALAK NPDAKPRILTLTQSTYDGILYNVEEIKGLLDGEVDTLHFDEAWLPHASFHDFYGDFHAIGEDRPRCKESMIFSTQSTHKL LAGLSQASQILVQDPENRQLDVPSFNEAYLMHTSTSPQYAIIASCDVAAAMMEQPGGQALVEESLVEALDFRRAMRKVDE EYGRDWWFRVWGPEELSDDGICDPADWQLKPEDRWHGFAGIEEGFNLLDPIKATLLTPGLDVDGSFEEMGIPAAIVTKYL TEHGVVVEKTGLYSFFIMFTIGITKGRWNTLISLLQQFKDDFDKNQPMWRIMPEFVARHPQYERVGLRDLCQKIHQLYAR HDIARLTTEIYLSEMEPAMKPSEAFAKTAHREIERVPVDELLGRVTAVLLTPYPPGIPLLIPGERFNRTIVDYLKFVQDF NRELPGFETDVHGLVATERDGRKVYCVDCVY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 2e-106 | 43 |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 5e-112 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| adi | YP_002795035.1 | Adi | VFG1670 | Protein | 9e-107 | 43 |
