Gene Information

Name : Deide_2p00400 (Deide_2p00400)
Accession : YP_002787798.1
Strain :
Genome accession: NC_012529
Putative virulence/resistance : Virulence
Product : cobalamin/Fe3+-siderophore ABC transporter, ATP-binding component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 54194 - 54985 bp
Length : 792 bp
Strand : +
Note : -

DNA sequence : 
ATGACCGAAGCTCCACTGTCCACCCGTAGCCTGCGCCTGAGCTACGGCGCCAACATCATCGTGCCTCAGCTGGATCTTCA
GGTGGCGGGCGGCAAGATCACCAGCATCATCGGCCCAAACGGTTGCGGGAAGAGCACGCTGCTGCGGGCCCTGGCCCGCC
TGCAACCGGCCAGCTCAGGCGAGATTCAGCTGTACGGACAGGCCCTGCATGCGCTGCCTGGGCGAGAGGTGGCCCGCCGG
CTGGCCATCCTTCCGCAGGGCCCGGCGGCGCCGGAGGGCCTGAGTGTCGAGGATCTGGTGTGGTTCGGTCGCCATCCGCA
TCAGGGCCGTTTCCCGGTGCGCCGCGAGGTTGACCGGCAGGCCGTGCAGTGGGCCCTGGCACAGACCGGAATGACCATTT
TCGCGGGCCGGACACTTGATGCCCTGTCCGGCGGACAGCGTCAGCGCGCCTGGATTGCCATGAGTCTGGCCCAGCAGACG
GACATTCTGCTGCTTGACGAGCCCACAACCTACCTGGACCTGTCTCACCAGCTTGAAGTGCTGCACCTCGCCCAGCACCT
GAACGCCGAACAGGGCAAGACCGTGGTGATGGTGCTGCACGACCTGAATCAGGCGGTGCGGTACAGCCACGAGATCATTG
CCATGAAGGGCGGCGAAATCTACGCCCAGGGCCCGGCTGAGGACGTCATGACCCCGGAACTGCTGCGCGACATTTTTGGC
CTGAAGGCGCATCTGCTGCTGGACCCGGATACCGGCCGGCCGCACATCATTCCTTATGGTCTGACACGGTAG

Protein sequence : 
MTEAPLSTRSLRLSYGANIIVPQLDLQVAGGKITSIIGPNGCGKSTLLRALARLQPASSGEIQLYGQALHALPGREVARR
LAILPQGPAAPEGLSVEDLVWFGRHPHQGRFPVRREVDRQAVQWALAQTGMTIFAGRTLDALSGGQRQRAWIAMSLAQQT
DILLLDEPTTYLDLSHQLEVLHLAQHLNAEQGKTVVMVLHDLNQAVRYSHEIIAMKGGEIYAQGPAEDVMTPELLRDIFG
LKAHLLLDPDTGRPHIIPYGLTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-59 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-51 48
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-58 47
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-58 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-58 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-58 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-58 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-51 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-51 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 8e-51 43
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 8e-51 43
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-49 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-49 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deide_2p00400 YP_002787798.1 cobalamin/Fe3+-siderophore ABC transporter, ATP-binding component BAC0164 Protein 9e-52 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deide_2p00400 YP_002787798.1 cobalamin/Fe3+-siderophore ABC transporter, ATP-binding component VFG1042 Protein 8e-52 48
Deide_2p00400 YP_002787798.1 cobalamin/Fe3+-siderophore ABC transporter, ATP-binding component VFG0925 Protein 1e-54 48