Gene Information

Name : phoB (Deide_2p01080)
Accession : YP_002787876.1
Strain :
Genome accession: NC_012529
Putative virulence/resistance : Virulence
Product : response regulator, OmpR; phosphate regulon transcriptional regulatory protein phoB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 157014 - 157685 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence :

GTGGCCCGTGTCCTGATTGTGGATGACGACCCGGCAATCCTGGAGATTCTGCGAGCCTATCTCGGGGCTGAGGGTCATGA
GGTGCTGGAAGCCCAGGACGGCCAGGAAGCACGGGCACTACTGCCGCGGGCCGACGTCGCCGTGATGGACTGGATGCTGC
CCGGCGCAGCCGGCCCGGTCCTGGCCCGCGAAGCCCGCGCGGCAGGGCTGGATCTGCCCATCCTGATGCTGACGGCGCGG
GGAGAGGAAGAAGACAAGTTGCACGGGCTGGAAGAGGGCGTTGACGACTATGTGGTCAAACCCTTCAGCCCGCGCGAAAT
TGTCGCGCGGGTGCGCGCCCTGCTCCGGCGCGTTGGAGTCCACCAGGACGTGCGCTCCGACAGTCTGACCATGGACCTGA
AACGGCGCACCGTAATGGTTGACGGCCTTCCTGTCGAGCTCTCACGCCTCGAATTTGATCTTCTCGCGGCGCTGGCGCTG
CATCCGGGTCTGGCCTGGACACGTGAACGCCTGCTTGAACGCCTGTGGGGGCCAGACTTCCCAGGAACTGAGCGGGTAGT
CGACGTGCATATCACTGCCCTGCGAAAAAAACTCGGGGACGACCCGGAGCGCCCCCGCTACATCGAAACGGTGCGCGGTG
TCGGGTACAGGTTCCGGGAACGCGGAGGCTAG

Protein sequence :

MARVLIVDDDPAILEILRAYLGAEGHEVLEAQDGQEARALLPRADVAVMDWMLPGAAGPVLAREARAAGLDLPILMLTAR
GEEEDKLHGLEEGVDDYVVKPFSPREIVARVRALLRRVGVHQDVRSDSLTMDLKRRTVMVDGLPVELSRLEFDLLAALAL
HPGLAWTRERLLERLWGPDFPGTERVVDVHITALRKKLGDDPERPRYIETVRGVGYRFRERGG

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
armR	AAN62112.1	putative response-regulator ArmR	Not tested	PAGI-2(C)	Protein	3e-13	42

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
phoB	YP_002787876.1	response regulator, OmpR; phosphate regulon transcriptional regulatory protein phoB	AE016830.1.gene1681.	Protein	1e-32	43
phoB	YP_002787876.1	response regulator, OmpR; phosphate regulon transcriptional regulatory protein phoB	AE000516.2.gene3505.	Protein	4e-26	43
phoB	YP_002787876.1	response regulator, OmpR; phosphate regulon transcriptional regulatory protein phoB	NC_012469.1.7685629.	Protein	3e-26	42
phoB	YP_002787876.1	response regulator, OmpR; phosphate regulon transcriptional regulatory protein phoB	NC_012469.1.7686381.	Protein	1e-27	42
phoB	YP_002787876.1	response regulator, OmpR; phosphate regulon transcriptional regulatory protein phoB	NC_002952.2859905.p0	Protein	5e-27	42
phoB	YP_002787876.1	response regulator, OmpR; phosphate regulon transcriptional regulatory protein phoB	NC_007793.3914279.p0	Protein	5e-27	42
phoB	YP_002787876.1	response regulator, OmpR; phosphate regulon transcriptional regulatory protein phoB	NC_007622.3794472.p0	Protein	5e-27	42
phoB	YP_002787876.1	response regulator, OmpR; phosphate regulon transcriptional regulatory protein phoB	NC_002745.1124361.p0	Protein	5e-27	42
phoB	YP_002787876.1	response regulator, OmpR; phosphate regulon transcriptional regulatory protein phoB	NC_009782.5559369.p0	Protein	5e-27	42
phoB	YP_002787876.1	response regulator, OmpR; phosphate regulon transcriptional regulatory protein phoB	NC_002951.3237708.p0	Protein	5e-27	42
phoB	YP_002787876.1	response regulator, OmpR; phosphate regulon transcriptional regulatory protein phoB	NC_003923.1003749.p0	Protein	5e-27	42
phoB	YP_002787876.1	response regulator, OmpR; phosphate regulon transcriptional regulatory protein phoB	NC_002758.1121668.p0	Protein	5e-27	42
phoB	YP_002787876.1	response regulator, OmpR; phosphate regulon transcriptional regulatory protein phoB	NC_009641.5332272.p0	Protein	5e-27	42
phoB	YP_002787876.1	response regulator, OmpR; phosphate regulon transcriptional regulatory protein phoB	NC_013450.8614421.p0	Protein	5e-27	42

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
phoB	YP_002787876.1	response regulator, OmpR; phosphate regulon transcriptional regulatory protein phoB	VFG1390	Protein	5e-25	44
phoB	YP_002787876.1	response regulator, OmpR; phosphate regulon transcriptional regulatory protein phoB	VFG1386	Protein	3e-22	41
phoB	YP_002787876.1	response regulator, OmpR; phosphate regulon transcriptional regulatory protein phoB	VFG1389	Protein	2e-20	41