Gene Information

Name : Deide_2p00080 (Deide_2p00080)
Accession : YP_002787764.1
Strain :
Genome accession: NC_012529
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 11758 - 13311 bp
Length : 1554 bp
Strand : -
Note : -

DNA sequence :
ATGACACAGACAATCAGCCCCAATCACGATCTGGCACGCCGGCTGCGTGAAGAGCGCCTCATAGGAGGCCTGCAACACTT
TGTCGGTGGCCAGTGGGTAGCCTCCAGCAGCGGCGAGACCTTCGACACGCACTCCCCGGTGGACAATGCCTTCCTGACCC
AGGTGGCCAGTGGCGACGCTCAGGACATCGACCGGGCTGCCCAGGCCGCCCACGAAGCCTTCCGGACCTGGCGGGAGGTC
AGCGGCGCCGAGCGGCGCAGGATCCTGCACCGCATTGCCGACCTGATCGAGGCGCGGGCTCAGGAAATCGCGGTGCTCGA
AAGCATCGATACCGGTCAGGCGATCCGGTTTATGAAATCCGCGGCCACCCGCGGCGCCGAGAACTTCCGCTTCTATGCCG
ACCGGGCGCCAGGCGCGGGCGATGGCCAGAGCCTGCCGGCCCCCGGCTTCATCAATTACACCCTGCGCCAGCCCATCGGC
CCGGTGGGCGTAATTACGCCCTGGAACACGCCGTTCATGCTGTCCACCTGGAAAATTGCTCCTGCGCTGGCGGCAGGCTG
CACGGTCGTGCACAAGCCGGCCGAGTGGAGCCCGGTCAGCGCCACGCTGCTGGCCGAAATCATGGACGAAGCGGGGCTGC
CGGGGGGTGTGCACAACCTGGTGCACGGCTTCGGCGAGAGCGCTGGCAAGGCGCTAACCGAGCACCCGCTGATCAAGGCC
ATCGCCTTCGTGGGCGAGACCACCACCGGGAGCCACATCATGCGCCAGGGGGCCGAGACCCTCAAGCGCGTGCATTTCGA
ACTAGGCGGTAAGAACCCGGTCGTGGTGTTCGACGATGCGGACCTGGACCGCGCTCTGGACGCCGTGGTGTTCATGATCT
ACTCGCTCAACGGCGAGCGCTGCACCAGTTCCAGCCGGGTGCTGGTGCAGGAAGGCATCTACGACGAGTTCACCGCCCGC
ATCGCCGAGCGCGCGCGCAACATCCGTGTCGGCGATCCCCTGGACCCTGAAACTGAGGTCGGGCCGCTGGTGCACCCTCG
CCATTTCGAGAAGGTCATGTCCTACTTCGGCAAGGCCCGTGAGGAAGGGGCCACCATCGCCGCCGGTGGCGAGCGCGTGG
GCCAAGCGGGGAACTTTGTCTCCCCCACCCTGTTTACCGGCGCCAGGAACGATATGGCCATCGCCCAGGAGGAGATTTTC
GGACCTGTGCTGACCGCCATTCCCTTCACCGACGAAGCCGACGCCCTGGCGCTGGCCAACGACGTGAAGTACGGCCTGGC
AGGCTACCTGTGGACCAACGACCTGACCCGCGCGCACCGCTTCGCGCAGGGCCTGGAGGCCGGGATGATCTGGGTCAACA
GCGAGAACGTGCGGCACCTGCCCACTCCCTTTGGCGGCGTGAAAAACAGTGGCATCGGCCGGGACGGCGGGGACTACTCC
TTTGAGTTCTACATGGAGACCAAGAACATCGCCATTTCCCTGGGCACCCACAAGACCGCGAAGCTGGGCGTCGGTCAGGC
GCCCAAAGTGGACAAGACCGTGGTGGAAGGATGA

Protein sequence :
MTQTISPNHDLARRLREERLIGGLQHFVGGQWVASSSGETFDTHSPVDNAFLTQVASGDAQDIDRAAQAAHEAFRTWREV
SGAERRRILHRIADLIEARAQEIAVLESIDTGQAIRFMKSAATRGAENFRFYADRAPGAGDGQSLPAPGFINYTLRQPIG
PVGVITPWNTPFMLSTWKIAPALAAGCTVVHKPAEWSPVSATLLAEIMDEAGLPGGVHNLVHGFGESAGKALTEHPLIKA
IAFVGETTTGSHIMRQGAETLKRVHFELGGKNPVVVFDDADLDRALDAVVFMIYSLNGERCTSSSRVLVQEGIYDEFTAR
IAERARNIRVGDPLDPETEVGPLVHPRHFEKVMSYFGKAREEGATIAAGGERVGQAGNFVSPTLFTGARNDMAIAQEEIF
GPVLTAIPFTDEADALALANDVKYGLAGYLWTNDLTRAHRFAQGLEAGMIWVNSENVRHLPTPFGGVKNSGIGRDGGDYS
FEFYMETKNIAISLGTHKTAKLGVGQAPKVDKTVVEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 2e-95 47
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 9e-72 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-76 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-80 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-80 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-80 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-80 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deide_2p00080 YP_002787764.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 9e-77 41