Gene Information

Name : Deide_1p00890 (Deide_1p00890)
Accession : YP_002787249.1
Strain :
Genome accession: NC_012527
Putative virulence/resistance : Virulence
Product : response regulator, CheY
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 145378 - 146061 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGACCATCCTGATCGTGGAAGATAACCCTGGGGTCCGGGATATGGTCCGCGAGTACCTCCAGGAGCACGGGTACCG
GGTCCGGGTGGCGTCCAACGGCCACGAGGGCCTGCTTGAAGTGCGCCATCACCGGCCTGACCTGGTGCTGCTGGACATGA
TGATGCCCGGCATGGACGGCCTGGAATTCCTCCGGCGTTTCCGCGCTGCTGAGCATGCTCCTGTAGTTTTTCTGACGGCC
CGTGACGCTGAACTCGACAAGGTGCTGGGCCTGGAACTCGGTGCCGACGATTACGTCACGAAGCCGTTCTCGATGGCTGA
GCTCCTGGCCCGCGTGCGCGCACACCTGCGCCGCGGCAACGAAGCGCCGCCCTCAGCGTTTGTCCGGGCCGGCGAACTGG
AAATGGACGCGGCGTCCAGAACCTTCCTGGTACAGGGCAGCCGGGTCGATCTGACCCGTTCCGAGTTTGAATTGATGGCA
GCATTCCTCCGGGCTCCCGGACGGGTCTTCTCGCGGCTGGAACTGCTGGAACAGCTTCAGGAAGAAGCTCTGGGTGCGGA
ACGCACCATCGACGTGCATGTCCGGAACCTGCGCGCGAAAATTGAGCCGGAACCGGGCAAGCCGAGGTTCATTGAAACGG
TGTTCGGCATGGGATACCGCCTGAATCCAGACCTGACGCCATGA

Protein sequence : 
MKTILIVEDNPGVRDMVREYLQEHGYRVRVASNGHEGLLEVRHHRPDLVLLDMMMPGMDGLEFLRRFRAAEHAPVVFLTA
RDAELDKVLGLELGADDYVTKPFSMAELLARVRAHLRRGNEAPPSAFVRAGELEMDAASRTFLVQGSRVDLTRSEFELMA
AFLRAPGRVFSRLELLEQLQEEALGAERTIDVHVRNLRAKIEPEPGKPRFIETVFGMGYRLNPDLTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deide_1p00890 YP_002787249.1 response regulator, CheY BAC0197 Protein 9e-23 43
Deide_1p00890 YP_002787249.1 response regulator, CheY AE000516.2.gene3505. Protein 3e-23 43
Deide_1p00890 YP_002787249.1 response regulator, CheY NC_012469.1.7685629. Protein 5e-23 42
Deide_1p00890 YP_002787249.1 response regulator, CheY BAC0638 Protein 7e-19 42
Deide_1p00890 YP_002787249.1 response regulator, CheY CP000647.1.gene2531. Protein 9e-24 41
Deide_1p00890 YP_002787249.1 response regulator, CheY CP001918.1.gene3444. Protein 6e-24 41
Deide_1p00890 YP_002787249.1 response regulator, CheY BAC0347 Protein 8e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deide_1p00890 YP_002787249.1 response regulator, CheY VFG0596 Protein 8e-25 42
Deide_1p00890 YP_002787249.1 response regulator, CheY VFG1390 Protein 5e-23 41