Gene Information

Name : Deide_07730 (Deide_07730)
Accession : YP_002785389.1
Strain : Deinococcus deserti VCD115
Genome accession: NC_012526
Putative virulence/resistance : Resistance
Product : amino acid ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 944764 - 945582 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence :
ATGACTCAGCGGGCCGCCCCATCCATCCACGCCCCCCCGAAGGCACTTTCTGAAGAGGGCCGGTCCAGCCCGGCTGAGGC
TGGCAGCACGCCGATCATTATTGCGCAGGGGGTAGAGAAGCACTTCGGGACGTTTCATGCCTTGCGGGGCGTCAACCTGG
AGGTGCGCAGCGGCGAGGTGGTCGTGATCATCGGTCCCTCGGGCAGCGGAAAAAGCACCTTCATCCGCACCCTCAACGCC
CTGGATCCCCACGACCGCGGCAGCATCACCATCGACGGCATTCCCCTCAACGGCCGTCACAACCTCGACGCCATCCGCCG
TGAGGTCGGCATGGTGTTCCAGAGCTTCAACCTGTTTCCGCACCTCAGCGTGCTGGACAACATCACCCTGGCCCCCATCC
GGGTTCGCCGCCTCAGCCGCGCCGAAGCAGAACAGCGTGGCCTGGAACTGCTGCGGCGGGTGGGAATCGAGGAGCAGGCG
CACAAGTTTCCGGCGCAGCTCAGCGGCGGTCAGCAGCAGCGGGTGGCGATTGCGCGGGCGCTGGCGATGGACCCGAAGAT
CATGCTGTTTGACGAGCCGACGAGTGCGCTGGACCCGGAGATGATCAAGGAAGTGCTGGACGTGATGAAGGAACTGGCGC
GCAGTGGCATGACGATGCTGGTGGTGACGCATGAGATGGGCTTTGCGCGTGAGGTGGCCGACCGGATCCTGTTTTTTGAT
CAGGGCACGGTGGTCGAGGACACCACCCCCGAAGCCTTCTATCAGAACCCGCAGCACGACCGCGCCAAGGCCTTCCTCTC
CAAAATTCTCGGCCACTAG

Protein sequence :
MTQRAAPSIHAPPKALSEEGRSSPAEAGSTPIIIAQGVEKHFGTFHALRGVNLEVRSGEVVVIIGPSGSGKSTFIRTLNA
LDPHDRGSITIDGIPLNGRHNLDAIRREVGMVFQSFNLFPHLSVLDNITLAPIRVRRLSRAEAEQRGLELLRRVGIEEQA
HKFPAQLSGGQQQRVAIARALAMDPKIMLFDEPTSALDPEMIKEVLDVMKELARSGMTMLVVTHEMGFAREVADRILFFD
QGTVVEDTTPEAFYQNPQHDRAKAFLSKILGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deide_07730 YP_002785389.1 amino acid ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-30 42
Deide_07730 YP_002785389.1 amino acid ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-26 41