Gene Information

Name : Deide_07200 (Deide_07200)
Accession : YP_002785331.1
Strain : Deinococcus deserti VCD115
Genome accession: NC_012526
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 886108 - 886830 bp
Length : 723 bp
Strand : -
Note : -

DNA sequence : 
GTGCTAGGCGTGCAGAACCTCACCGTCCGCTACGGATCGCACGTCGCCCTGCAGGACGCGACGGTGCGCTTCGAGGCAGG
CTCCTTCAGCGCCATCATCGGGCCAAACGGCGCCGGCAAAAGCACGCTGCTCAAAACGCTGGTGGGTCTCCTGCCCGGCA
CCGAAGGCCGCGTGGCTTTTGACGAAGGCCATTCTGCGCGTCAGTGCATCTCCTATGTCCCGCAGCAGCAGACGCTGGAC
TGGGGCTTTCCGGTTACCGTATGGGACGTGGCCATGATGGGCCGCACCGGACGGCTGGGCTGGCTCCGCTGGCCGTCGAA
GCGGGACCGGCAGCTGGTCGAAGACGCCCTGAAGGAGACCGGAGTCTACGAGCTGCGCGCACGGCATATCGGCGCGCTTT
CGGGGGGGCAGCGTCAGCGTGTGCTGCTGGCCCGTATGCTTGCGCGCCAGGGCCATCTGCTGCTGCTGGATGAACCCCTG
ACCGGGGTTGACAGTGCCACCCAGGAACAGCTGATGGCTCTGCTCAAAACGCAGGCGCAGCGAGGCCGGGCTGTCGTCAT
GGTGACCCACGACCTGGAGCAGGCGCGCCGCTGGTGTGATCATCTGCTGCTGATCAACCGCCGCATCATTGCCGACGGCA
CACCCGAGCAGGTCTACACTCCGGCGAACATCGAGGCGACCTTCAGCACCAGTCATCTGGGTCATACCCACGCGGAAGCC
TGA

Protein sequence : 
MLGVQNLTVRYGSHVALQDATVRFEAGSFSAIIGPNGAGKSTLLKTLVGLLPGTEGRVAFDEGHSARQCISYVPQQQTLD
WGFPVTVWDVAMMGRTGRLGWLRWPSKRDRQLVEDALKETGVYELRARHIGALSGGQRQRVLLARMLARQGHLLLLDEPL
TGVDSATQEQLMALLKTQAQRGRAVVMVTHDLEQARRWCDHLLLINRRIIADGTPEQVYTPANIEATFSTSHLGHTHAEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-43 43
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-43 43
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 5e-44 43
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 6e-44 43
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-44 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deide_07200 YP_002785331.1 ABC transporter ATP-binding protein BAC0440 Protein 1e-47 45
Deide_07200 YP_002785331.1 ABC transporter ATP-binding protein BAC0400 Protein 7e-44 44
Deide_07200 YP_002785331.1 ABC transporter ATP-binding protein BAC0350 Protein 3e-44 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deide_07200 YP_002785331.1 ABC transporter ATP-binding protein VFG0526 Protein 3e-44 43