Gene Information

Name : Deide_05960 (Deide_05960)
Accession : YP_002785190.1
Strain : Deinococcus deserti VCD115
Genome accession: NC_012526
Putative virulence/resistance : Resistance
Product : DhlC family symporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 695511 - 697097 bp
Length : 1587 bp
Strand : +
Note : -

DNA sequence :
ATGACCCTTCTCCTCGCGGCCATCATCGTGGCCATTACCCTGGGCGTCACCTTCTGGGCCAGCGGGCGCAACACCAGCGC
CTCTGATTTCTACGTGGCCGGTGGCCGCATCAGCGCCACCCAGAACGGGATCGCCATTGCCGGGGATTACATGAGCGCCG
CCAGCTTCCTGGGCATTACTGGCCTGATTGCCCTCAACGGCTATGACGGCTTCATGTACTCGGTGGGCTGGTTTATCGCG
TACCTCACTGTGCTGTTCATCGTGGCCGAGCCGCTGCGCAACCTGGGCAAGTACACCCTGGCTGACATGCTGGTCTACCG
CCTCAAGGACCCCAAGGTCCGCTTCTATGCCGCGCTCTCGACCATTACGGTCAGCACCTTTTACATGATCGCGCAGGTCG
TGGGCGCAGGCAGCCTGATCAGCTTGCTGTCTGGTGGTGTCCTGAAGGCAGAGGTTGCCATTCCGCTGGTCGGTATCCTA
ATGATCATCTACGTCGTGGTCGGCGGCATGCTGGCCACCACCTGGGTACAGATCATCAAGGCCATCCTGCTGATGTTCGC
CACCATCGTGATGACCTTGTTCATCCTGGCGCGTTTCGGGTTTTCGTTCAGCGAGCTGCTGGGCCAGGTCGAGGCCCGCA
ACGGCGTGGAATATCTCGGTGCCGGCGTGAAGTACAAAAACCCGCTGGATCTGATCAGCCTGTGCCTGGCGCTGGTGCTG
GGTACCGCCGGTCTGCCGCACATTCTGGTGCGCTTCTTCACCGTGCCTACCGCTCAGGACGCACGCAAGAGCGTTGTGTG
GGCCATGATTCTGATCGGCGCGTTCTACGTGATGACCGCCTTCATGGGCAACGCTGCCAACGTGCTGGTGGGCAAGGACC
GCATCATCGAGGCCAACGCCGCAGGCAACATGGCCGCGCCTATGCTCGCGCAGTATCTGTTCGGCGGACCTGGCACGACT
GGCGGGGAGTTCGGACTGGCCTTCGTGACGGCTGTGGCGTTCGCAACCATTCTGGCAGTGGTGGCCGGTCTGACCATTGC
CGCGAGCACCAGCTTCACGCACGACATTTACAACGGCGTGATGCGCGGCGGACAGGCCACTGAGGCCCAGCAGTTCCGGG
TGGCACGTATGGCTACCGTGGCAGTGGGTATCGTGGCGATTCTGCTGGGCCTGCTGGCCAAAAACCAGAACGTGGCCTTC
CTGGTGGCCCTGGCATTCGCGATTGCCGCCAGTGCCAACCTGCCGGTCATCCTGTTCACGCTGTTCTGGCGCCGCTTTAA
TGCCAACGGCGCGGTGTGGGGCATTGTGGGTGGTCTGGCAGTTACGCTGGCACTCATTGCCATCAGCCCCAACATCATGG
GCGTTGACCCGCCTGAGAAGACCACGGGCCGCCACGTGATTCAGGCCCCGGCAATCTTCCCGCTGGAAAATCCCGGCATC
ATCAGTATTCCTGCCGGATTTGCGCTGGCTGTGCTGGGCACCCTGCTGGGCCGCCGCCGCGAGGAAGACGAACGTTCCTT
CGAGGAAATGCAGTACCGCGCCTACACCGGCGCAGGCATGGATGGTACCGTCGCCGCACACGACTGA

Protein sequence :
MTLLLAAIIVAITLGVTFWASGRNTSASDFYVAGGRISATQNGIAIAGDYMSAASFLGITGLIALNGYDGFMYSVGWFIA
YLTVLFIVAEPLRNLGKYTLADMLVYRLKDPKVRFYAALSTITVSTFYMIAQVVGAGSLISLLSGGVLKAEVAIPLVGIL
MIIYVVVGGMLATTWVQIIKAILLMFATIVMTLFILARFGFSFSELLGQVEARNGVEYLGAGVKYKNPLDLISLCLALVL
GTAGLPHILVRFFTVPTAQDARKSVVWAMILIGAFYVMTAFMGNAANVLVGKDRIIEANAAGNMAAPMLAQYLFGGPGTT
GGEFGLAFVTAVAFATILAVVAGLTIAASTSFTHDIYNGVMRGGQATEAQQFRVARMATVAVGIVAILLGLLAKNQNVAF
LVALAFAIAASANLPVILFTLFWRRFNANGAVWGIVGGLAVTLALIAISPNIMGVDPPEKTTGRHVIQAPAIFPLENPGI
ISIPAGFALAVLGTLLGRRREEDERSFEEMQYRAYTGAGMDGTVAAHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 3e-83 50
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 3e-61 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deide_05960 YP_002785190.1 DhlC family symporter BAC0570 Protein 9e-67 48
Deide_05960 YP_002785190.1 DhlC family symporter BAC0564 Protein 6e-74 45