Gene Information

Name : Deide_00600 (Deide_00600)
Accession : YP_002784611.1
Strain : Deinococcus deserti VCD115
Genome accession: NC_012526
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 68109 - 70076 bp
Length : 1968 bp
Strand : -
Note : -

DNA sequence :
ATGTCAACTGAGCAGCTGAGCATCAACACCATCCGCACGCTGTCTATCGATGCCGTACAGGCCGCCAACAGTGGCCACCC
TGGCGCGCCGCTGGGCATGGCCCCGATGGCCTACGTGGTGTGGCAGGAGTTCCTGCGCTTCAACCCGAAGCAGTCCCAGT
GGGCCGGGCGCGACCGCTTCGTGCTGTCGGCGGGACATGCCAGCATGCTCATCTACAGTCTTTTGCACCTGACCGGCTAC
GACATGCCGATGGAGGACCTGAAGAACTTCCGCCAGTGGGGCAGCAAGACCCCCGGCCATCCGGAGTTCTTCCACACCCC
AGGTCTGGACGCCACCACCGGGCCGCTGGGCCAGGGCGCGGCCATGACCGTTGGCCTGGCTATGGCCGAAGCGCACCTTG
CCGAGCGCTACAACCGTCCTGAATTTCCCATTTTCGACAACCACGTGTACTCCATCCTGGGTGATGGCGACCTCCAGGAA
GGCATCAACCACGAAGCCGCTGCACTGGCCGGGCATCTGCGCCTGGGGAAACTGATCTGGCTGCATGACGACAACCAGAT
TCAGCTGGATACCCCCACCGAAAAGGCTGAGTCCGAGGACACCGCTGCCCGCTTCCGGTCCTACGGCTGGGAAGTGCTGC
GCGTCGAGGACGGCAACGACCTGGACCAGATTCGTCAGGCGATTACAGCAGCCAAGGCCAACACTGCGCAGCCCAGCCTG
ATTCAGGTGCGCACAGTGATCGGATTCGGCAGCCCGCGCGCCGGCACCAGCAAGGCCCACGGCGAGCCGCTGGGCGAGGA
GGGCGTGGCGCAGACCAAGCAGGCCCTCGGCTGGGATTACCCTGCCTTCACCGTGCCGGATGAGGTGCGCGCCCACATGG
ACGCCACCGAGCGCGGCGCGAAGTACGAAGCCGAGTGGAACGCGCTGCTGGAGGGCTACCGCGCTGCCTACCCCGACCTG
GGCCGTGAAGTGGACGCCATGCTCAACCGTGAGCTGCCAGCCAACCTCGCCGACGTGCTGCCCAGTTACGAGGTCGGCGG
CAAGGCGGTCGCCACCCGCAACGCCAGCGGCGAGGTCATCAACGCGCTGGCCAAGGTCGTGCCGGGGCTGATGGGCGGCA
GCGCCGACCTGTCAGGAAGCACCAAGACCACCATCAAGGACGGCGGCGAGATGCAAGCCGGCCAGATGGGCGGACGCAAC
GTGCTGTTCGGCGTGCGCGAGTTCGGCATGGCTGCCGCCGGCAACGGCCTGAGCCTGTACGGCGCCATCCGGCCGCTGGT
GGGCACCTTCCTGGTGTTCGCGGACTACCTCAAGCCTGCTTTCCGTCTGAGCGCCATTCAGATGCAGCCGGTGACGTACG
TGCTGACTCACGACTCCATCGGCCTGGGCGAGGACGGCCCCACCCACCAGCCGATTGAACAGTTGGCCATGCTGCGCAGC
GTGCCTGGCGCGCACGTGATCCGCCCGGCCGACGCCAACGAAACGGCCGCCGCGTGGCAGATGGCCCTGGAGTACGACAA
GGGCCCCACCGCCATCGCCCTGTCACGCCAGGACCTGCCGATTCTGCCCCGAAACCACGCTGGCGTGAAAAAAGGCGCCT
ACGTGCTGCGTGATCCCGAAGGCGCAGCCGCGCAGGTCATTCTGATCGCCTCGGGCAGTGAAGTCAGCCTGGCGCTCGAC
GCTGCCGAGGCATTGGCCGCTGAAGGTATCGGCGCCCGCGTGGTCAGCATGCCATGCATGGAAGTCTTCCGCGCGCAGGA
TGCCAGCTACCGCGACAGCGTGCTGACTCCTGGCGTCAAGCGCGTGGCCATCGAGGCCGCCAGCAAGTCGCCCTGGTACG
AATGGACCCAGGGCGGCCCGGTCATCGGCATGGACACCTTCGGGGCCTCCGCGCCGGCCAAGGTGCTGTTCGAGAAGTTC
GGTTTCAGCGTGCCGAATGTGGTGAAGGTCGTCAAGAGCGTGCTGTAA

Protein sequence :
MSTEQLSINTIRTLSIDAVQAANSGHPGAPLGMAPMAYVVWQEFLRFNPKQSQWAGRDRFVLSAGHASMLIYSLLHLTGY
DMPMEDLKNFRQWGSKTPGHPEFFHTPGLDATTGPLGQGAAMTVGLAMAEAHLAERYNRPEFPIFDNHVYSILGDGDLQE
GINHEAAALAGHLRLGKLIWLHDDNQIQLDTPTEKAESEDTAARFRSYGWEVLRVEDGNDLDQIRQAITAAKANTAQPSL
IQVRTVIGFGSPRAGTSKAHGEPLGEEGVAQTKQALGWDYPAFTVPDEVRAHMDATERGAKYEAEWNALLEGYRAAYPDL
GREVDAMLNRELPANLADVLPSYEVGGKAVATRNASGEVINALAKVVPGLMGGSADLSGSTKTTIKDGGEMQAGQMGGRN
VLFGVREFGMAAAGNGLSLYGAIRPLVGTFLVFADYLKPAFRLSAIQMQPVTYVLTHDSIGLGEDGPTHQPIEQLAMLRS
VPGAHVIRPADANETAAAWQMALEYDKGPTAIALSRQDLPILPRNHAGVKKGAYVLRDPEGAAAQVILIASGSEVSLALD
AAEALAAEGIGARVVSMPCMEVFRAQDASYRDSVLTPGVKRVAIEAASKSPWYEWTQGGPVIGMDTFGASAPAKVLFEKF
GFSVPNVVKVVKSVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 5e-139 50
tktA AAO17218.1 TktA Not tested tcd island Protein 2e-138 49