Gene Information

Name : pyk (Deide_00040)
Accession : YP_002784554.1
Strain : Deinococcus deserti VCD115
Genome accession: NC_012526
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 4462 - 5886 bp
Length : 1425 bp
Strand : +
Note : -

DNA sequence :
ATGAAACACTCTGACCGATCCACCAAGATCGTCGCCACCATCGGACCGGCAAGCCGCGACCCCGAAGTTCTCAGCCGCAT
GATCGATGCCGGCCTTAATGTGGTCCGCATGAACTTCAGTCATGGTGACCACGAGGATCACCGCCAGACCGTGCAGATGG
TCCGGGAGCTCGCTGCCCGCAAGGGTGTCACCATCGGCATCCTGCAGGACCTGCAGGGTCCCAAGATTCGTGTGGGCCGC
TTTGCTCAGGGCGCCGTGACGCTGAACGCTGGAGACAAGTTCGTGATTACCATGGACGATGTCGACGGTGACGAGTCGCG
CGTGACCAGCACCTACAAGAGTCTGGCCGAGGACGTTCAACCTGGTATGGCCCTGCTGCTTGACGACGGCAACATGGCCC
TCCGGGTCGATCACGTCCGTGGAGCAGATATCCACACCACCGTCGTGATCGGCGGGGTGTTGAAGAACAACAAGGGCATC
AATGTGCCCGACGCCGACCTGAGTGTGCCGGCCATGTCGGAAAAAGATGTGTCGGACATGGAGTTCGGTGCACAGATCGG
CGTGGACTGGGTGGCCCTGAGTTTTGTGCGCTCACGCGACGATCTGCTGCTGGCGCGGCACTACCTCTCCCGTTACGGCA
GCCGTGCCAAGCTGATGGCCAAGATCGAAAAACCGCAGGCTGTCGAGCGCTTCGCCGACATCCTCAAGGAAGTCGACGGC
ATCATGGTGGCCCGCGGTGACCTGGGCGTCGAGATGCGTCCCGAGCAGGTGCCGACGATCCAGAAGCACATCATCCGGAT
GTGCCGCGAAGCGGGTAAACCCGTGATCACGGCCACCCAGATGCTCGAGAGCATGATCAGCCTGCCCCGCCCTACCCGTG
CGGAGGCTTCGGACGTCGCCAACGCCATTTACGACGGAACCGACGCTGTGATGCTCTCGGCCGAGAGTGCTGCCGGTCAG
TACCCCGTAGAGGCCGTAGCCATGATGGACCGCATTGCCCGCGAGGCCGAGTCCAGCGATCATTACCTGCTGCTGCAGCG
TCACCTGATGGTGGACACTGAGCTGGCGCAGGACGCTATTGCGCACTCTGCGTGCAGCATCGGTGAAAACCTGGAAGCCT
CCGTCATCGTGACGTTCACCAGCACCGGCGGCGCGGCGGCACGGGTGGCCAAAAACCGCCCACCGCTGGCGATCCTGGCG
CTGACTCCCAACGAGCAGACCCGAAACCAGCTGGCCCTGTCATGGGGCGTGGTGCCTGTCCTGAGCGAAGACCCCAGGGA
CACTGATGACATGGTCCGTATCGCCAACGATGAGCTGCGCAAGAGTGGTCTGGCTGATCTGGGTGACCGCTATGTGATTA
CGGCGGGTGTACCTTTCGGGGTGCGGGGAACCACCAACATGTTGCGTGTAGAACGCCTGCGCTGA

Protein sequence :
MKHSDRSTKIVATIGPASRDPEVLSRMIDAGLNVVRMNFSHGDHEDHRQTVQMVRELAARKGVTIGILQDLQGPKIRVGR
FAQGAVTLNAGDKFVITMDDVDGDESRVTSTYKSLAEDVQPGMALLLDDGNMALRVDHVRGADIHTTVVIGGVLKNNKGI
NVPDADLSVPAMSEKDVSDMEFGAQIGVDWVALSFVRSRDDLLLARHYLSRYGSRAKLMAKIEKPQAVERFADILKEVDG
IMVARGDLGVEMRPEQVPTIQKHIIRMCREAGKPVITATQMLESMISLPRPTRAEASDVANAIYDGTDAVMLSAESAAGQ
YPVEAVAMMDRIAREAESSDHYLLLQRHLMVDTELAQDAIAHSACSIGENLEASVIVTFTSTGGAAARVAKNRPPLAILA
LTPNEQTRNQLALSWGVVPVLSEDPRDTDDMVRIANDELRKSGLADLGDRYVITAGVPFGVRGTTNMLRVERLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-78 45
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 5e-78 45
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 7e-78 45
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-78 45
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 8e-71 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_002784554.1 pyruvate kinase VFG0479 Protein 1e-78 45