Gene Information

Name : Deide_02801 (Deide_02801)
Accession : YP_002784847.1
Strain : Deinococcus deserti VCD115
Genome accession: NC_012526
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 313413 - 314201 bp
Length : 789 bp
Strand : -
Note : orfB of ISDds1 - IS3 family member

DNA sequence : 
GTGAGCGGGTACCACAGCTGGCGAAGAAGGCCGATCTGCGACCGCAAGGAAGAGGATGCGCTGCTCGAGCAGCGCATCCA
GGAAGTGCATCAACGTAGTAAACGCCGCTATGGGGCGCCACGCATTCACGCGGAGTTGCACGCTGGAGGAGTGCGCGTGT
CCCGCAAGCGGGTGGCGCGTCTGATGCGTGCCAGTGGTCTGCGGGCCAAGGGAAAGCGCCGCTGGGTGCGGACCACGGGG
AGCAGTCACACCATGGCCGTCTGCCCGAACCTGCTTGAGCGGCGGTTCGAGGTCTCGCAGCCGAACCAGGTCTGGGCGTT
GGACCTGACGTATCTGCCCACGAAAGAGGGCTGGCTGTATCTCGCAGTCACCTTAGACCTGCATTCGCGAGCCGTGGTGG
GTTACGCGATGGACATGCAGATGCCAGCCACCTTGCCACTGGCGGCCCTTCAGATGGCTGCTGGCCGACGTCTTCCGCCA
CCAGGCCTCCTTCATCACAGCGACAGGGGCAGTCAATACGCGAGTGGCATCTTTCAGGCAGAACTGGCCCGCATGCGGGC
CAGGGGCAGTATGAGTCGTAAGGGGGATTGTTGGGACAACGCCGTGGTGGAAAGCTTCTTCAGCTCCCTGAAAAGGGAGT
TGCTGGAGGACACCATCTTTGAGACCCGGGACGTGGCCCGACAAGCCGTATTTGAATTCATCGAGGTCTTCTACAACCGT
CAGCGTCGTCACTCGTCTCTTGGGTACTTGACGCCCCTGGAGTTCGAACGCCAAGCTACAGCTGCTTAA

Protein sequence : 
MSGYHSWRRRPICDRKEEDALLEQRIQEVHQRSKRRYGAPRIHAELHAGGVRVSRKRVARLMRASGLRAKGKRRWVRTTG
SSHTMAVCPNLLERRFEVSQPNQVWALDLTYLPTKEGWLYLAVTLDLHSRAVVGYAMDMQMPATLPLAALQMAAGRRLPP
PGLLHHSDRGSQYASGIFQAELARMRARGSMSRKGDCWDNAVVESFFSSLKRELLEDTIFETRDVARQAVFEFIEVFYNR
QRRHSSLGYLTPLEFERQATAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 7e-42 50
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 4e-45 49
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 9e-45 49
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-44 48
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 5e-51 47
unnamed AAF09022.1 unknown Not tested SHI-O Protein 3e-51 47
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 9e-51 47
unnamed AAF09030.1 unknown Not tested SHI-O Protein 7e-51 47
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 9e-51 47
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 7e-51 47
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 7e-51 47
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 7e-51 47
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-46 47
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-46 47
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-46 47
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 8e-50 46
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 2e-29 41
unnamed AAC31485.1 L0006 Not tested LEE Protein 2e-29 41
unnamed CAI43898.1 putative transposase Not tested LEE Protein 2e-30 41
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 2e-30 41
Z5089 NP_290241.1 transposase Not tested LEE Protein 1e-30 41
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 1e-30 41
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 1e-27 41
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 1e-27 41
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 1e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deide_02801 YP_002784847.1 transposase VFG1631 Protein 4e-42 50
Deide_02801 YP_002784847.1 transposase VFG1706 Protein 3e-51 47
Deide_02801 YP_002784847.1 transposase VFG0785 Protein 6e-31 41
Deide_02801 YP_002784847.1 transposase VFG1484 Protein 9e-28 41