Gene Information

Name : Deide_21530 (Deide_21530)
Accession : YP_002786933.1
Strain : Deinococcus deserti VCD115
Genome accession: NC_012526
Putative virulence/resistance : Resistance
Product : methionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 2595255 - 2596460 bp
Length : 1206 bp
Strand : -
Note : -

DNA sequence :
ATGGCTCAACAATCCAAGGAGTTCGGGTTCCGTACCCGGGCGGTGCATGCTGGCCACGGCCTTGATCCTGTCACGGGGGC
GCACGCCGTGCCTATCTATGCCACCTCTACCTTCGGCTACGGCAGTGCCGAGCGTGGCGCCCGCCTGTTTGCTGGCGAGG
AAAGTGGTTATTTCTACTCTCGTCTGAGCAACCCCACTGTGCGTGCCTTCGAGGAGAAGGTCGCCAGCCTGGAAGAAGCC
GGAGACGCCGTGGCCTTCGGCAGTGGCATGGGGGCAGCGAGCGCCATTGCCCTGACCTTCCTCAAGGCGGGGGACGAGGT
CGCCTTCATGGGGCCGCTGTACGGCGGCACCGAGGGACTGCTGCGCGACATTCTCGGCCGCTTTGACGTCAGGGTGCACG
ACGTGCGTGATCTGGACGAACTGCGGGACGTAATGAACAGCCGCACCCGTCTGGTCTGGCTGGAAACCCCCACCAACCCC
ACTCTCCGCGTGGTGGACCTGCAGGCAGCCAGCGACATTGCCCACGCTGCCGGAGCCCTGGTGGTCGTGGACAACACCTT
TTCCACGCCCTACCTGACCCGGCCGCTGGAGCACGGCGCGGACCTCGTGATGCACTCGGCCACCAAGTACATCAGCGGAC
ACGGTGACGTGGTGGCCGGGGTGGTCGCTGCGGGAGCCGAACTGGTGGCTGAACTGCGTCTGCATGGGCTCCGCCATGTG
GGCTCGGTGTTGGCACCCTTTGAGGCTTACCTGCTGCTGCGAGGCCTGAAAACCCTGCCGCTGCGGATGGAAGCCCACTG
CTCTGGCGCGCAGGCCCTGGCGACTGCGCTGCTGGGCCACCCAGGGATACAGGCGGTTCACTACCCGGGATTGCCCACAC
ACCCGGGCCATGAGCTGGCCGGCCGGCAGATGAAGGCCTACGGGGGGCTGGTCAGCCTGGATTTGGGTTCACAGGACGCT
GCCTTCCGGTTCCTGAACGCCCTGAAGCTTTTTACTCAGGCCGTCAGCTTGGGCGACGTGGAAAGCCTGTCGTGCCACCC
GGCCAGCACCACCCATCAGCTGTTGGGCGAAGAAACGCTGGCCCGCCAGGGCGTTACACCTGGACTGGTGCGCCTCTCGG
TGGGCATCGAGGACCCCCAGGACCTGATTGACGATGTGCTTCAGGCCCTGCAGGCTGCCGAGGAACGCACAACCGTCTCC
CTTTGA

Protein sequence :
MAQQSKEFGFRTRAVHAGHGLDPVTGAHAVPIYATSTFGYGSAERGARLFAGEESGYFYSRLSNPTVRAFEEKVASLEEA
GDAVAFGSGMGAASAIALTFLKAGDEVAFMGPLYGGTEGLLRDILGRFDVRVHDVRDLDELRDVMNSRTRLVWLETPTNP
TLRVVDLQAASDIAHAAGALVVVDNTFSTPYLTRPLEHGADLVMHSATKYISGHGDVVAGVVAAGAELVAELRLHGLRHV
GSVLAPFEAYLLLRGLKTLPLRMEAHCSGAQALATALLGHPGIQAVHYPGLPTHPGHELAGRQMKAYGGLVSLDLGSQDA
AFRFLNALKLFTQAVSLGDVESLSCHPASTTHQLLGEETLARQGVTPGLVRLSVGIEDPQDLIDDVLQALQAAEERTTVS
L

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-45 42
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-46 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deide_21530 YP_002786933.1 methionine gamma-lyase BAC0207 Protein 4e-71 49