Gene Information

Name : Deide_20300 (Deide_20300)
Accession : YP_002786793.1
Strain : Deinococcus deserti VCD115
Genome accession: NC_012526
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 2443947 - 2445224 bp
Length : 1278 bp
Strand : -
Note : -

DNA sequence : 
GTGAGTAAAGAGAAGATCGCCGTGCTGGGCCTGGGATACGTGGGCCTCCCCCTCGCTGTGGCTCTGGCCGAGAAATTCGG
GGATGTGCTGGGTTTCGATATCAACGCTGCCCGTGTCGCAGAGTTGGGCCAGGGGCACGACCGTACAGGGGAAATCGATG
ATGGGCGGCTGCGTTCTTCACGTCTGCGGTGCAGCAACGAGGCGGGGCACTTGGCCGACCGCACCCTGTTCATCGTGACA
GTGCCCACACCGATTGACGCGCACAACACCCCAGACCTGACGCCGCTGATCCGGGCCAGCGAGATGATCGGCCAGTACCT
GAAAACGGGAGACGTGGTGGTCTACGAGTCCACGGTGTATCCCGGCGTAACTGAGGAAGTGTGTGGTCCGGTGCTGGCAC
GGGTCTCGGGTCTGCGGCAGTACGAGGATTTCAAGTTGGGCTACAGTCCCGAGCGCATCAACCCCGGCGACAAGGTGCAT
ACGCTGGAAAAGATCACGAAGGTCGTGTCTGGTCAGGATTCCGAGACCATGAACCGGGTGGCCGCCGTCTACGAGGCAGT
AGTGGAAGCGGGAATTCACCGCGCGCCCAGCATCCGGGTCGCGGAGGCCGCTAAGGTCATCGAGAATACCCAGCGTGATC
TGAATATCGCGCTGATGAATGAACTGGCACTGATTTTCGACCGACTGGGCATCCGCACTCTGGACGTGTTGGAAGCAGCG
GGGACCAAGTGGAACTTCCTGCCGTTCCGCCCCGGGCTGGTGGGAGGGCACTGTATCGGTGTGGACCCCTATTACCTGAC
CCAGAAGGCGCAGGAGGTGGGATACTACCCGCAGGTCATTCTGGCTGGTCGCCGCGTGAATGACGGCATGGGCGCTTTTG
TAGCGCAGAAACTGGTGAAGCTGCTCATTGCCGCCGACCGACCGGTCAAAGGTGCGCGGGTCGGGGTGCTGGGGTTGACC
TTCAAGGAAAACGTTCCTGATCTCCGCAACAGTCGTGTGCCGGATATCATTGCAGAACTGCGTCAATTCGGGATTGAGCC
ATTGATTCATGATCCACACGCGGAGCAAGCAGAGGCCATGCACGAGTACAACCTGTCCCTGAGTGACCTGGAGGCCTTTC
AAGAGCTGGACGGCCTAATTTTGGCTGTGCCTCACCAAGCTTATCTGAACATGTCGCGCTCCCGGCTCACCGGAATGGTG
AACGGAACGGGCTTGCTGGTCGACGTAAAATCTGCCCTCTCGGAAAGCGACCTGCCGGGCCGCTATTGGAGTCTCTGA

Protein sequence : 
MSKEKIAVLGLGYVGLPLAVALAEKFGDVLGFDINAARVAELGQGHDRTGEIDDGRLRSSRLRCSNEAGHLADRTLFIVT
VPTPIDAHNTPDLTPLIRASEMIGQYLKTGDVVVYESTVYPGVTEEVCGPVLARVSGLRQYEDFKLGYSPERINPGDKVH
TLEKITKVVSGQDSETMNRVAAVYEAVVEAGIHRAPSIRVAEAAKVIENTQRDLNIALMNELALIFDRLGIRTLDVLEAA
GTKWNFLPFRPGLVGGHCIGVDPYYLTQKAQEVGYYPQVILAGRRVNDGMGAFVAQKLVKLLIAADRPVKGARVGVLGLT
FKENVPDLRNSRVPDIIAELRQFGIEPLIHDPHAEQAEAMHEYNLSLSDLEAFQELDGLILAVPHQAYLNMSRSRLTGMV
NGTGLLVDVKSALSESDLPGRYWSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 4e-107 55
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-95 52
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-95 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deide_20300 YP_002786793.1 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 5e-96 52