Gene Information

Name : capM (Deide_20271)
Accession : YP_002786789.1
Strain : Deinococcus deserti VCD115
Genome accession: NC_012526
Putative virulence/resistance : Virulence
Product : capsular polysaccharide synthesis protein CapM
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 2440303 - 2440908 bp
Length : 606 bp
Strand : -
Note : -

DNA sequence : 
GTGAAGTCTCAGAACCTCCAGATCCGTGCAATCTTTTACGAACCGTTCAAGCTCGCTGGGGATCAAGTACTTGCAGCGCT
GGGCCTCGTTGTACTGTCGCCTATTATGGTGCTGGTCGCACTGGCTATCTTCGTGGATGACCCCGGTCCGGTGATTTTCC
GGCAGCAACGCGCCGGGCGTTGGCATCGACCTTTCACGATTTACAAGTTCCGTACCATGAAACGCAACACTCCGAATGTC
TCGACTGAAGAAATGCGCCGCTTAGGCCTCAGTCCTTACACGCGCCTAGGGCCGATGCTGCGGCGGACCAGTCTTGACGA
GCTGCCCCAATTGCTTAACGTCCTGCGAGGCGAAATGAGCTTGGTGGGGCCACGCCCAGCTCTTCTAACGCAAAGTGTCG
TATTACGCGGCAGAGAAAGTGCAGGTGTTCACAGGCTGCGTCCAGGTATCACTGGTCTGGCGCAGATCACCGGGCGTGAT
GATCTATCTGACGCTGAGAAGATTCGCCAAGATATCCTCTATCTGCGACACCAAGGGCTCTTAACCGACCTGATTCTGTT
GATATATACTGTACGTCGAGTTTTTAAGGCGCATGGAGCGTATTAA

Protein sequence : 
MKSQNLQIRAIFYEPFKLAGDQVLAALGLVVLSPIMVLVALAIFVDDPGPVIFRQQRAGRWHRPFTIYKFRTMKRNTPNV
STEEMRRLGLSPYTRLGPMLRRTSLDELPQLLNVLRGEMSLVGPRPALLTQSVVLRGRESAGVHRLRPGITGLAQITGRD
DLSDAEKIRQDILYLRHQGLLTDLILLIYTVRRVFKAHGAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 7e-34 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
capM YP_002786789.1 capsular polysaccharide synthesis protein CapM VFG1309 Protein 2e-37 49
capM YP_002786789.1 capsular polysaccharide synthesis protein CapM VFG1369 Protein 6e-22 43