Gene Information

Name : mtrA (Deide_19550)
Accession : YP_002786710.1
Strain : Deinococcus deserti VCD115
Genome accession: NC_012526
Putative virulence/resistance : Virulence
Product : response regulator OmpR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2355323 - 2356009 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
ATGAACGCTTATGATGCAGGGGTGACTTCCCAACGCATTCTTGTCATTGAGGATGACCTCGATATTGCCAATGTCCTGAA
GATGGACCTAGGAGATGCCGGGTACACCGTCGAACACGCCGACTCCGCCATGAATGGCCTGATCAAAGCCCGTGAGGAGC
ACCCTGATCTGATTCTGCTCGACCTGGGTCTGCCTGACTTTGATGGGGGTGATGTTGTCCAGCGTCTGCGCAAGAACAGC
GCGGTGCCGATTATCGTCCTGACTGCCCGTGACACTGTGGACGAGAAGGTGCGGCTGCTTGGGCTGGGTGCCGATGATTA
CCTGATCAAGCCCTTCCATCCCGACGAGCTGCTGGCCCGCGTGAAGGTTCAGCTGCGTCAGCGCATCACTGAGAGCCTCA
GCATGGGTGACCTGACCCTGGACCCGCAAAAGCGGCTGGTGACCTACAAGGCAGAGGAACTGCGTCTGTCACCCAAGGAA
TTTGACATCCTTGCCCTTCTGATTCGCCAGCCAGGCCGGGTGTACTCCCGCCAGGAGATCGGCCAGGAAATCTGGCAGGG
CCGCCTGCCAGAAGGCAGCAACGTGGTGGATGTCCACATGGCCAACCTCCGGGCCAAGCTCCGCGACCTCGACGGTTATG
GTCTGCTGCGCACCGTTCGTGGTGTGGGCTACGCCCTGCGTGGTTAA

Protein sequence : 
MNAYDAGVTSQRILVIEDDLDIANVLKMDLGDAGYTVEHADSAMNGLIKAREEHPDLILLDLGLPDFDGGDVVQRLRKNS
AVPIIVLTARDTVDEKVRLLGLGADDYLIKPFHPDELLARVKVQLRQRITESLSMGDLTLDPQKRLVTYKAEELRLSPKE
FDILALLIRQPGRVYSRQEIGQEIWQGRLPEGSNVVDVHMANLRAKLRDLDGYGLLRTVRGVGYALRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 5e-25 43
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 4e-25 43
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mtrA YP_002786710.1 response regulator OmpR BAC0347 Protein 2e-25 42
mtrA YP_002786710.1 response regulator OmpR NC_002952.2859905.p0 Protein 3e-27 42
mtrA YP_002786710.1 response regulator OmpR NC_013450.8614421.p0 Protein 4e-27 42
mtrA YP_002786710.1 response regulator OmpR NC_007793.3914279.p0 Protein 4e-27 42
mtrA YP_002786710.1 response regulator OmpR NC_007622.3794472.p0 Protein 3e-27 42
mtrA YP_002786710.1 response regulator OmpR NC_002745.1124361.p0 Protein 4e-27 42
mtrA YP_002786710.1 response regulator OmpR NC_009782.5559369.p0 Protein 4e-27 42
mtrA YP_002786710.1 response regulator OmpR NC_002951.3237708.p0 Protein 4e-27 42
mtrA YP_002786710.1 response regulator OmpR NC_002758.1121668.p0 Protein 4e-27 42
mtrA YP_002786710.1 response regulator OmpR NC_009641.5332272.p0 Protein 4e-27 42
mtrA YP_002786710.1 response regulator OmpR AE000516.2.gene3505. Protein 4e-24 42
mtrA YP_002786710.1 response regulator OmpR NC_003923.1003749.p0 Protein 5e-27 41
mtrA YP_002786710.1 response regulator OmpR BAC0125 Protein 1e-27 41
mtrA YP_002786710.1 response regulator OmpR BAC0083 Protein 2e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mtrA YP_002786710.1 response regulator OmpR VFG1389 Protein 1e-25 42
mtrA YP_002786710.1 response regulator OmpR VFG1390 Protein 8e-28 42
mtrA YP_002786710.1 response regulator OmpR VFG0596 Protein 1e-28 41