Gene Information

Name : phoP (Deide_19210)
Accession : YP_002786669.1
Strain : Deinococcus deserti VCD115
Genome accession: NC_012526
Putative virulence/resistance : Virulence
Product : response regulator OmpR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2317862 - 2318530 bp
Length : 669 bp
Strand : -
Note : -

DNA sequence : 
ATGGACCAACGCATCCTTCTTATCGAAGACAATCCGGACATCACTCGCGTCGTCCAGTACGAACTGGAACAAGCCGGTTA
CCGTGTCCTGACGGCCGCCGACGGCATCACTGGGTTGACGTCGGCCCGCGAACACGCTCCGGATCTGGTGGTTCTCGACC
TCGGCCTGCCAGATTTCGACGGCGCGGAAGTGGCCCGTCGCCTGCGCAAGACCAGCAGCGTGCCGATCATCATCCTGACC
GCCATGGACGCGGTGGACCGCAAGGTAAACCTGCTGGAGGCCGGTGCCGACGACTATATGACCAAGCCCTTCCATCCGGA
GGAACTGGTCGCGCGCGTCAAGGTGCAGTTGCGTCATCAGCAGCACGGCGAAGTGATCTCCATAGGTGCGCTTGAAATTC
ATCCGCAAAAGCGCCTGTGCCATTACAACGGTCACGAGGTGCGCCTGTCGCCCAAGGAGTTCGACCTGCTGACCTTCCTG
GCCCGCCAGCCGGGGCGCGTCTACTCCCGCCAGGAAATTGAGCGCGAAGTTTGGAACGGTGAGCTGCCCAGCAACAGCAA
CGTTGTGGACGTGCACATGGCCAACATGCGCGCCAAGCTGCGCGACCTTGATGGTTACGGCATCATCCGCACGGTTCGCG
GCATCGGGTACGCCCTCAAGACGCCCTGA

Protein sequence : 
MDQRILLIEDNPDITRVVQYELEQAGYRVLTAADGITGLTSAREHAPDLVVLDLGLPDFDGAEVARRLRKTSSVPIIILT
AMDAVDRKVNLLEAGADDYMTKPFHPEELVARVKVQLRHQQHGEVISIGALEIHPQKRLCHYNGHEVRLSPKEFDLLTFL
ARQPGRVYSRQEIEREVWNGELPSNSNVVDVHMANMRAKLRDLDGYGIIRTVRGIGYALKTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-25 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoP YP_002786669.1 response regulator OmpR NC_002952.2859905.p0 Protein 5e-30 42
phoP YP_002786669.1 response regulator OmpR NC_002951.3237708.p0 Protein 7e-30 42
phoP YP_002786669.1 response regulator OmpR NC_002758.1121668.p0 Protein 7e-30 42
phoP YP_002786669.1 response regulator OmpR NC_009641.5332272.p0 Protein 7e-30 42
phoP YP_002786669.1 response regulator OmpR NC_013450.8614421.p0 Protein 7e-30 42
phoP YP_002786669.1 response regulator OmpR NC_007793.3914279.p0 Protein 7e-30 42
phoP YP_002786669.1 response regulator OmpR NC_003923.1003749.p0 Protein 7e-30 42
phoP YP_002786669.1 response regulator OmpR NC_007622.3794472.p0 Protein 5e-30 42
phoP YP_002786669.1 response regulator OmpR NC_002745.1124361.p0 Protein 7e-30 42
phoP YP_002786669.1 response regulator OmpR NC_009782.5559369.p0 Protein 7e-30 42
phoP YP_002786669.1 response regulator OmpR HE999704.1.gene2815. Protein 4e-30 42
phoP YP_002786669.1 response regulator OmpR BAC0197 Protein 1e-26 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoP YP_002786669.1 response regulator OmpR VFG0596 Protein 1e-25 43
phoP YP_002786669.1 response regulator OmpR VFG1389 Protein 3e-25 42