Gene Information

Name : Deide_15860 (Deide_15860)
Accession : YP_002786304.1
Strain : Deinococcus deserti VCD115
Genome accession: NC_012526
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3842
EC number : -
Position : 1930478 - 1931476 bp
Length : 999 bp
Strand : +
Note : -

DNA sequence : 
ATGGTACAGGTGCCCCAGGAGCCCAGCCCAGCCCTGCGTGTCCAGGGTCTGAGCAAGGCGTTCGGGACCGTCCAGGCCGC
ACAGGACGTATCACTCACCGTGCAGGCAGGGGAAACGCTGGCGCTGCTGGGCCCGTCGGGCTGCGGAAAAAGTACCGTGC
TGCGCGGCGTGGCAGGCCTGGAACGCCTGGACGGTGGCCAGGTTGAGGTGGGGGGCCGGAATGTCACGGCGCTCCCTCCG
GAAGCTCGCCATGTGGGCCTGGTGTTTCAGGACTACTCCCTGTTTCCCCACCTGAGCGTCCTCGATAACGTGGCTTACGG
GCCCCGCATGCGCGGTGCGCGGCGCCCGGACGCCCAGGCCCGGGCCCGTGAGGTGCTGGCGTTGGTAGACCTCTCAGCGC
TGGAGGCCCGCCGTCCGGCTCAACTGTCCGGGGGTCAGCAGCAGCGTGTGGCGCTGGCGCGCGCTCTGGCTACTGCTTCC
CCCCTGCTGCTGCTGGATGAGCCGCTGTCGAATCTGGACGAAAAGCTGCGGGCACAGTTGCGAACCGACCTGCATGCTCT
GTTCGCGCGGGTGGAGGCCGGGGTCCTGCTGGTGACCCACGACCAGCGTGAGGCTCTGGCCCTGGCCCACCGGGTGGCGG
TCATGCGCGCAGGACGGATCGTGCAGCAGAACACGGCCGCCGAAGTGTTTGCCAGACCCGCAACCGCCTGGGTGGCTTCT
TTTCTTGGACACCAGAACGTCCTCCCCCATGCAGAGGGTCAGGCTCTGCTCATTCCGGAACTGGCCGTGCATCTGGGAAC
GGGTCCTCAGTACACCATCACGTCCAATCAGGTGACCGAGTCTGGAGAAACCATTACTGTAGCCCATTCACTGGGCTTAC
TCACCCTTCACTTGAGTCCCCGCGAGCGTAATCTCGTGCACGGCAAGTCCCTGCAGCTCGAACTTGATAGCGCTGTGATG
CGTCTGATCCCGGATGACCGCAGCCCTTCGCCCTCCTGA

Protein sequence : 
MVQVPQEPSPALRVQGLSKAFGTVQAAQDVSLTVQAGETLALLGPSGCGKSTVLRGVAGLERLDGGQVEVGGRNVTALPP
EARHVGLVFQDYSLFPHLSVLDNVAYGPRMRGARRPDAQARAREVLALVDLSALEARRPAQLSGGQQQRVALARALATAS
PLLLLDEPLSNLDEKLRAQLRTDLHALFARVEAGVLLVTHDQREALALAHRVAVMRAGRIVQQNTAAEVFARPATAWVAS
FLGHQNVLPHAEGQALLIPELAVHLGTGPQYTITSNQVTESGETITVAHSLGLLTLHLSPRERNLVHGKSLQLELDSAVM
RLIPDDRSPSPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-19 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deide_15860 YP_002786304.1 ABC transporter ATP-binding protein BAC0604 Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deide_15860 YP_002786304.1 ABC transporter ATP-binding protein VFG1206 Protein 5e-32 44