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Name : clpB (Deide_12640) Accession : YP_002785937.1 Strain : Deinococcus deserti VCD115 Genome accession: NC_012526 Putative virulence/resistance : Virulence Product : Chaperone clpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1536474 - 1539032 bp Length : 2559 bp Strand : + Note : - DNA sequence : TTGAATCCTGAACGCTTTACCGAAGCCAGTGCCCAGGCCCTGGGCGCCGCCCAACAGCTGGCCCAGGCCTCCGGGCACCA GACCCTGACGCCCGCCCACGTTCTGCGCACCCTGACTGACAACGACATCGCGGCCCGTGCCCTGACCCTGGCCGGCGCCG ATCTGGGAGCAGCCAGAGCGGCACTCGACGCCGAGATCGGCAAGCTCCCAAGAGTGCAGGGAGGCGGAGACAACCTGTAC CTGGATCCTGCCCTGAGCCGGGCATTCCAGAAAGCCGACACCCTGGCAGGTCAGCTGGGCGATAGCTTTGTGGCGGCCGA CACTCTGCTGCTGGCCCTGCGCGGCGAATACCGGGGGCCGGGGCTGCCGGGCGAGGCTGAGCTCAACCGCGCCATCACTG AACAACGCAAGGGGAAAACCGTGACGAACAAAACTTCTGAACAACAGTTCGATGCCCTCGCCAAATACGGCACCGACCTG ACGCAGCGCGCCCGGGACGGCAAGTTCGACCCGGTCATCGGACGCGACGAGGAAATCCGCCGCACGATGCAGATCCTGCT GCGCCGCACCAAGAACAACCCGGTTCTTATTGGGGAACCTGGGGTGGGCAAGACCGCTATCGCTGAGGGACTGGCTATCC GTATCGTGCAGGGTGACGTGCCGGACGGCCTGAAAAACAAGCGAATCGTCAGCCTGGAGATGGGCAGCCTGCTGGCCGGG GCGAAGTTCCGCGGCGAGTTCGAGGAGCGCCTCAAGGGGGTGATCGACGAGGTTGTGCAGTCTGCCGGCGAAATTATTCT GTTTGTGGACGAGCTTCATACCATCGTGGGAGCTGGCAAGACCGAGGGCAGCCCTGACGCGGGCAACATGCTCAAGCCGG CCCTGGCGCGGGGCGAGTTGCACCTGATCGGCGCTACTACCCTGGACGAGTACCGCGAGATCGAGAAGGACCCTGCGCTG GAGCGGCGCTTCCAGCCGGTGTTTGTGGACGAGCCCAGCGTCGAGGACACCATCTCGATCCTGCGCGGCATCAAGGAAAA GTACCAGACCCACCACAATGTGGAAATCACCGACCCGGCGCTGGTCGCAGCCGCACAACTGTCCAACCGATACATTTCTG ACCGTCAGCTGCCGGACAAGGCCATCGACCTGATCGACGAGTCAGCGGCGCGCCTGCGCATGGCACTGGAAAGCAGCCCC GAGCGGATCGACCAGCTGCAGCGCCGCAAACTTCAGCTGGAAATCGAGCGTGAAGCCCTGCGCAAGGAAAAGGACCAGGA CTCGCAAAACCGCCTGCTTGATATCGAAGAAAGCCTCAAGTCGCTTGAAAGCGAGCTGAGCGATGTTCGCGCCCGCTGGC AGAGCGAACAGCACGACGTGCATGAATTGAAGGCCAAACGCGACGCCCTGGACCAGGTACGAACCGACATCGAAAAGGCG CGGCGCGACTACGATCTGCAACGTGCCGCCGAACTCGAATACGGTCAGCTGCCTCAGCTGGAAAAAGAAGTCGCCGACCT TGCCGAGAAGCTCAAGGGCGCCGAGTTCGCCCACACCCAGGTCACCGAGGAAGACGTCGCGTCGGTCGTCAGCCGCTGGA CTGGGGTCCCAGTCAGCAAACTGATGGAAGGCGAGCGCGAGAAGCTGCTGCGCCTTGAAGAGGCCCTGCACGGGCGCGTC ATCGGGCAGGACCGTGCCATCATCAGCGTCTCGGACGCCATCCGCAGGGCGCGCGCTGGGCTGAACGACCCCAACCGCCC GCTTGGCAGCTTCATGTTCCTGGGGCCGACCGGCGTGGGTAAGACTGAGCTGGCCAAAGCCCTGGCTGAATTCCTGTTTG ACAGCCCTGACGCCATGGTCCGGCTGGACATGAGCGAATACATGGAAAAACACTCGGTCTCGCGGCTGATCGGCGCCCCT CCCGGCTACGTGGGTTACGAGGAAGGCGGGCAGCTCACCGAGTCGGTGCGCCGGCGCCCCTACGCCGTGATTCTGCTCGA CGAAATTGAAAAAGCACATCCTGACGTGTTCAATGTGCTGCTGCAGGTGCTCGACGATGGTCGCCTGACTGACGGCCAGG GCCGAACGGTGGACTTTCGCAACACCCTGATTATCCTGACCAGCAACATCGGCTCGCCGCTGATTCTGGAAGCGCAGGCG CGGGGTGACAGCGCCGAAAGCATCCGTGATCAGGTGCTGGCAGTGCTGAATCAGCACTTCCGCCCGGAGTTCCTGAACCG GGTCGACGACATCATCGTGTTCGATGCCCTGACGGCGGCAGACCTGACCCGCATCGTGGATATCCAGACGGCTGGCCTGC GCAAGCGCCTGGCTGAGCGGCGCGTGACGCTGCACCTGAGCGACTCGGCCAAGGCCCGCCTCGCAGAGATCGGCTACGAT CCCGCTTTCGGCGCCCGCCCACTCAAGCGTGCCATTGCCCGACAGATCGAAACGCCGCTGGCCCGTGAAATCCTGCAGGG CCACGTACCGGACAGCAGCAGTCTGCACGTGGACTATGTCGATGGCCAGTTCAGGTTCAATACCGGAGTTCTCAACTAA Protein sequence : MNPERFTEASAQALGAAQQLAQASGHQTLTPAHVLRTLTDNDIAARALTLAGADLGAARAALDAEIGKLPRVQGGGDNLY LDPALSRAFQKADTLAGQLGDSFVAADTLLLALRGEYRGPGLPGEAELNRAITEQRKGKTVTNKTSEQQFDALAKYGTDL TQRARDGKFDPVIGRDEEIRRTMQILLRRTKNNPVLIGEPGVGKTAIAEGLAIRIVQGDVPDGLKNKRIVSLEMGSLLAG AKFRGEFEERLKGVIDEVVQSAGEIILFVDELHTIVGAGKTEGSPDAGNMLKPALARGELHLIGATTLDEYREIEKDPAL ERRFQPVFVDEPSVEDTISILRGIKEKYQTHHNVEITDPALVAAAQLSNRYISDRQLPDKAIDLIDESAARLRMALESSP ERIDQLQRRKLQLEIEREALRKEKDQDSQNRLLDIEESLKSLESELSDVRARWQSEQHDVHELKAKRDALDQVRTDIEKA RRDYDLQRAAELEYGQLPQLEKEVADLAEKLKGAEFAHTQVTEEDVASVVSRWTGVPVSKLMEGEREKLLRLEEALHGRV IGQDRAIISVSDAIRRARAGLNDPNRPLGSFMFLGPTGVGKTELAKALAEFLFDSPDAMVRLDMSEYMEKHSVSRLIGAP PGYVGYEEGGQLTESVRRRPYAVILLDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIILTSNIGSPLILEAQA RGDSAESIRDQVLAVLNQHFRPEFLNRVDDIIVFDALTAADLTRIVDIQTAGLRKRLAERRVTLHLSDSAKARLAEIGYD PAFGARPLKRAIARQIETPLAREILQGHVPDSSSLHVDYVDGQFRFNTGVLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-155 | 50 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-107 | 43 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-102 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 8e-103 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_002785937.1 | Chaperone clpB | VFG2084 | Protein | 1e-105 | 44 |
