Gene Information

Name : Deide_11610 (Deide_11610)
Accession : YP_002785821.1
Strain : Deinococcus deserti VCD115
Genome accession: NC_012526
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1406294 - 1407184 bp
Length : 891 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGACTGAGCACCAGAGTGGAACTCCCCAACTGAAGCAGGGCTTTGCCGAGATGTTCAAAGGCGGCGTGATCATGGACGT
CGTTACGGCGGATCAGGCCCGCATCGCCGAAGCTGCCGGCGCGACGGCTGTCATGGCCCTTGAGCGCGTTCCTGCCGATA
TCCGTCAGGACGGCGGCGTGGCGCGGATGAGCGACCCGAAGATGATTAAAGAGATCATCGCCGCGGTGACTATTCCCGTA
ATGGCCAAGGTGCGCATTGGGCACGTCATCGAAGCGCAGATCCTGCAGGCCCTCGGCGTGGACTTCATCGATGAGTCCGA
AGTGCTGACTCCTGCCGACGAGCAGTTTCACATCCTGAAAAGCGAGTTCAAGGTGCCGTTCGTGTGTGGCGCCAAGAATC
TCGGCGAAGCGCTGCGCCGCGTCGGCGAAGGTGCCAGCATGATCCGCACCAAAGGCGAGGCCGGCACCGGCAACGTCGTG
GAAGCGGTTCGTCACGCCCGCACCGTGCTGGGCGAGATCCGCGCCATCCAGTCCAAGCCTGCCGAGGAACTGATGACCAC
GGCCCGTGATCTGCAGGCACCGTATGAACTGGTGAAGTACGTTCATCAGCACGGCCGCCTCCCGGTCGTGAACTTTGCTG
CGGGTGGCGTGGCGACTCCTGCCGACGCGGCGCTGATGATGTACCTGGGCCTGGACGGCGTCTTTGTCGGCAGCGGCATC
TTCAAGAGCGACAACCCCGAGCGCCGCGCCCACGCCATCGTCAAGGCCGTGACGCATCACAACAACCCGGACGTGCTGGC
CGAGATCAGCGAGGACCTCGGTGCCCCCATGACCGGCATCAATATTGATGACCTGATCCCGGCCGAGCGCCTCGCCAGCC
GTGGCTGGTAA

Protein sequence :
MTEHQSGTPQLKQGFAEMFKGGVIMDVVTADQARIAEAAGATAVMALERVPADIRQDGGVARMSDPKMIKEIIAAVTIPV
MAKVRIGHVIEAQILQALGVDFIDESEVLTPADEQFHILKSEFKVPFVCGAKNLGEALRRVGEGASMIRTKGEAGTGNVV
EAVRHARTVLGEIRAIQSKPAEELMTTARDLQAPYELVKYVHQHGRLPVVNFAAGGVATPADAALMMYLGLDGVFVGSGI
FKSDNPERRAHAIVKAVTHHNNPDVLAEISEDLGAPMTGINIDDLIPAERLASRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-82 65
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 9e-83 65
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-82 65