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Name : kdpB (ROP_09540) Accession : YP_002778146.1 Strain : Rhodococcus opacus B4 Genome accession: NC_012522 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 995820 - 997922 bp Length : 2103 bp Strand : - Note : - DNA sequence : GTGAGTGTGAACGTGACCAGTCGTCCGGAGAACGAGGCGGCCACGGCGTCCGAGGCCGGCCACGACCCGGCGCCAGTGAA GGCGGGAATCTTCAGCCCCGCCCAGCTGGTGACGGCGCTACCGGGCGCCGTGCGCAAACTCGACCCCCGGCACCTCGCCC GCAACCCGGTGATGTTCGTCGTGTTCGTCGGCTCCGTCGTCACCACCGTCATGGCCGTCGCCGACCCGTCGGTGTTCTCC TGGGCTGTCGTCGCCTGGCTGTGGTTCACCGTGCTGTTCGCGAATCTGGCCGAGTCGGTCGCGGAGGGGCGGGGCAAGGC CCAGGCGGCGAGCCTGCGGAAGGTGAAGCAGGACACGGTCGCCCACCGGATCACGGCGAGTGGCCGGGTGGAGTCGGTGG CGGGTACCGACCTGACCGTCGGTGACCGGGTCGTCGTCGAGGCGGGGGAGGTGATACCCGGCGACGGCGACGTCGTCGAC GGCATTGCGACCGTGGACGAGTCGGCCATCACCGGCGAGTCGGCGCCCGTCGTCCGCGAATCCGGCGGCGACCGGTGCGC CGTCACCGGTGGCACGACCGTGCTGTCCGACCGGATCGTCGTGCGTATCACCGCGGCCCCCGGACAGTCGTTCGTGGATC GGATGATCGCCCTCGTGGAGGGGGCGGCGCGGCAGAAGACGCCGAACGAAATCGCGCTGAACATCCTGTTGGCGTCGCTG ACGATCATCTTCCTGCTGGCTGTCGTCGCGATCGGTCCGATGGGTCTGTATGCGGGCCAGGAGCAGGATCCGATCAAGCT GATCGCGCTGCTGGTGTGCCTGATCCCCACCACGATCGGGGCGCTGCTGTCGGCCATCGGCATCGCCGGGATGGATCGGC TGGTGCAGCGGAACGTCCTGGCGATGTCGGGGCGGGCGGTGGAGGCCGCGGGCGACATCGACACACTGCTGATGGACAAG ACCGGCACCATCACGTTCGGCAACCGGCAGGCCACGGCCGTGTATCCCGCACCGGGGGTTTCCGCGATCGAGTTGGCTAC GGCCGCACGGTTGTCCAGTCTCGCGGACGGCACCCCCGAGGGGCGCAGCATCGTGGACCTGTGCGCCCGGGACTTCGGGT TGGACCCGGCACCGTCCGAGGCGGAGCGAGCGGCGGAGTTCGTGCCGTTCACGGCGCAGACCCGGATGAGCGGACTCGAC ATCGACGGCGCCCGGATCCGCAAGGGCGCGAGCGACGCCGTGCTGACCTGGGTGCAGGCGCTCGGCGGGCACGCGGCGTC CGCCGTCACCGACAGTGTGAACCAGATCGCGCAGGCCGGGGGAACACCGTTGGTGGTCGCCGCCGTCAACGGAGACGCAG CGACGGTGCTCGGCGTGATCGCGCTGTCGGACGTGGTGAAGCCGGGCATCGCCGAGAGGTTCGCGGAACTGCGGGCCATG GGGATTCGCACGGTGATGATCACCGGCGACAACCCGTTGACGGCGAAGGCCATCGCGGCCGAGGCCGGAGTCGACGACTT CATGGCCGAGGCGACACCCGAGGACAAGCTCGCGCTGATCCGGCAGGAACAGGAGGGCGGCCGGCTCGTCGCGATGACCG GGGACGGCACCAACGACGCCCCGGCGCTGGCCCAGGCGGATGTCGGGGTGGCGATGAACACCGGCACGTCGGCGGCGAAG GAAGCCGGGAACATGGTGGATCTCGATTCGGACCCCACCAAGCTCATCGAGGTGGTGGAGATCGGCAAGCAGCTGCTCAT CACGCGCGGTGCGCTCACCACGTTCTCGCTCGCCAACGACCTGGCCAAGTACTTCGCGATTCTCCCCGCCCTGTTCAGCG GCATCTACCCGCAGCTGGACACGCTGAACATCATGCGGCTGGCCACCCCGGAATCGGCCATCCTGTCGGCGGTGATCTTC AACGCCGTCGTGATCGTCGCGCTGATCCCGTTGTCGCTGAAAGGTGTTCGCTACCGTCCGTCGTCGGCGTCCACGCTGCT GGGCCGCAACCTCCTGATCTACGGCCTCGGCGGCGTGATCACGCCGTTCGCCGGTATCTGGCTCATCGACCTCGTCGTTC GTCTCGTTCCCGGAATTGGGTGA Protein sequence : MSVNVTSRPENEAATASEAGHDPAPVKAGIFSPAQLVTALPGAVRKLDPRHLARNPVMFVVFVGSVVTTVMAVADPSVFS WAVVAWLWFTVLFANLAESVAEGRGKAQAASLRKVKQDTVAHRITASGRVESVAGTDLTVGDRVVVEAGEVIPGDGDVVD GIATVDESAITGESAPVVRESGGDRCAVTGGTTVLSDRIVVRITAAPGQSFVDRMIALVEGAARQKTPNEIALNILLASL TIIFLLAVVAIGPMGLYAGQEQDPIKLIALLVCLIPTTIGALLSAIGIAGMDRLVQRNVLAMSGRAVEAAGDIDTLLMDK TGTITFGNRQATAVYPAPGVSAIELATAARLSSLADGTPEGRSIVDLCARDFGLDPAPSEAERAAEFVPFTAQTRMSGLD IDGARIRKGASDAVLTWVQALGGHAASAVTDSVNQIAQAGGTPLVVAAVNGDAATVLGVIALSDVVKPGIAERFAELRAM GIRTVMITGDNPLTAKAIAAEAGVDDFMAEATPEDKLALIRQEQEGGRLVAMTGDGTNDAPALAQADVGVAMNTGTSAAK EAGNMVDLDSDPTKLIEVVEIGKQLLITRGALTTFSLANDLAKYFAILPALFSGIYPQLDTLNIMRLATPESAILSAVIF NAVVIVALIPLSLKGVRYRPSSASTLLGRNLLIYGLGGVITPFAGIWLIDLVVRLVPGIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 3e-171 | 60 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 2e-171 | 60 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 8e-154 | 56 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-153 | 56 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-153 | 56 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-153 | 56 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-153 | 56 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 1e-154 | 55 |
