Gene Information

Name : mntB (ROP_70550)
Accession : YP_002784247.1
Strain : Rhodococcus opacus B4
Genome accession: NC_012522
Putative virulence/resistance : Virulence
Product : manganese ABC transporter permease protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 7708087 - 7708974 bp
Length : 888 bp
Strand : -
Note : -

DNA sequence : 
ATGGACGTCATCGACTTCTTCGTCGACCCCCTGCGCTACGACTTCATGGTCCGTGCGCTGATCACCACCCTGATCGCGGC
GGTGGTGTGTGCGGTGCTGTCATGCTGGCTGGTGCTGATCGGCTGGTCGCTGATGGGTGATGCGGTCTCGCACGCCGTCC
TGCCCGGCGTGGTCCTGGCCTACATCGTCGGCGCCCCGTTCGCGATCGGCGCGGTGATCTTCGGATTCCTCGCCGTTGCG
TTGATCGGGCTGGTCCGCGACACCAGCCGGGTCAAGGAGGACGCCGCGATCGGCATCGTGTTCTCCACCCTGTTCGCCCT
CGGACTGGTGCTGGTCTCCGTGACCCCGAGCCAAACCGATCTGAACCACATCATTTTCGGAAACCTGCTGGGTGTCAGCC
GGTCCGACCTCGTCCAGATCGCGATCCTCGGGGCGTTCGTGTTCGTGGCACTGATCGTCAAGCGCCGCGACTTCACGCTG
TACGCCTTCGATCCCACCCATGCGCACGCCATCGGCCTGAACCCCCGGATGCTCGGGGCGGCGCTGCTGGGGCTGCTGGC
CCTGACGGCGGTGGTGGCCCTGCAGGCCGTCGGTGTCATCCTGGTCGTGGCCATGCTGATCATTCCCGGGGCGACGGCGT
ACCTGCTGACCGACAGTTTCCATCGGATGCTGGTCATCGCGCCGGCGATCTCGGCGTCCTGCGCCGTCATCGGTCTGTAT
CTGAGTTATCACCTCGACACCGCCAGCGGCGGCATGGTCGTGCTGTCCCAGGGCGCGGTCTTCGCGCTGGTCTATCTGTT
CGCGCCGCGGCAGGGCGTGATCGGTCGCCGGATCACCGCGTCCCGGCGTCGCCGGGCATCCGCCGCGGCGGCGGTGGCCG
ACCACTGA

Protein sequence : 
MDVIDFFVDPLRYDFMVRALITTLIAAVVCAVLSCWLVLIGWSLMGDAVSHAVLPGVVLAYIVGAPFAIGAVIFGFLAVA
LIGLVRDTSRVKEDAAIGIVFSTLFALGLVLVSVTPSQTDLNHIIFGNLLGVSRSDLVQIAILGAFVFVALIVKRRDFTL
YAFDPTHAHAIGLNPRMLGAALLGLLALTAVVALQAVGVILVVAMLIIPGATAYLLTDSFHRMLVIAPAISASCAVIGLY
LSYHLDTASGGMVVLSQGAVFALVYLFAPRQGVIGRRITASRRRRASAAAAVADH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-42 47
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-42 47
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-42 47
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-42 47
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-42 47
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 3e-43 43
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-43 43
sitC NP_461784.1 permease Virulence SPI-1 Protein 4e-43 43
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-43 43
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-43 43
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 3e-39 42
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 2e-39 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mntB YP_002784247.1 manganese ABC transporter permease protein BAC0442 Protein 1e-48 51
mntB YP_002784247.1 manganese ABC transporter permease protein BAC0352 Protein 1e-42 47
mntB YP_002784247.1 manganese ABC transporter permease protein BAC0441 Protein 3e-44 47
mntB YP_002784247.1 manganese ABC transporter permease protein BAC0351 Protein 2e-43 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mntB YP_002784247.1 manganese ABC transporter permease protein VFG0528 Protein 1e-42 47
mntB YP_002784247.1 manganese ABC transporter permease protein VFG0527 Protein 2e-43 43