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Name : pdx1 (ROP_68630) Accession : YP_002784055.1 Strain : Rhodococcus opacus B4 Genome accession: NC_012522 Putative virulence/resistance : Unknown Product : pyridoxal biosynthesis lyase PdxS Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0214 EC number : - Position : 7488280 - 7489182 bp Length : 903 bp Strand : + Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate DNA sequence : GTGAGCACCCCCGACACCACCCCCACCACCGGTACGGCGCGCGTCAAGCGCGGCATGGCCGAGATGTTGAAGGGCGGGGT CATCATGGACGTCGTCACCCCGGACCAGGCGAAGATCGCCGAGGACGCCGGTGCCGTCGCGGTAATGGCACTCGAGCGGG TGCCCGCGGACATCCGCGCCCAGGGCGGCGTGTCCCGGATGAGCGATCCGGACATGATCGACGGCATCATCTCCGCCGTC TCGATCCCGGTGATGGCCAAGGCCCGGATCGGGCACTTCGTCGAGGCGCAGATCCTGCAGTCGCTCGGTGTCGACTACAT CGACGAGTCCGAGGTCCTCACCCCGGCCGACTACGCCAACCACATCGACAAGTGGAAGTTCACCGTTCCGTTCGTCTGTG GTGCCACCAACCTCGGCGAGGCGCTGCGCCGCATCACCGAGGGTGCGGCGATGATCCGCTCGAAGGGCGAGGCCGGCACC GGTGACGTGTCCAACGCGACCACCCACATGCGCACGATCGGCGGGGAGATCCGCCGGCTGACGTCGCTGAGCGAGGACGA GCTGTACGTGGCGGCCAAGGAACTGCAGGCCCCGTACGACCTGGTCGTCGAGGTCGCCAAGGCCGGCAAGCTGCCGGTCA CCATGTTCACCGCCGGTGGCATCGCCACCCCGGCCGATGCGGCGATGATGATGCAGCTCGGTGCGGAGGGTGTGTTCGTC GGCTCCGGCATCTTCAAGTCGGGCAACCCGGCCGAGCGGGCCGCGGCGATCGTCAAGGCCACCACGTTCTTCGACGACCC GGACGTCCTGGCGAAGGTCTCCCGCGGGCTGGGTGAGGCCATGGTCGGTATCAACGTCGACGACATCCCGGTCCCGCACC GGCTCGCCGAGCGCGGCTGGTGA Protein sequence : MSTPDTTPTTGTARVKRGMAEMLKGGVIMDVVTPDQAKIAEDAGAVAVMALERVPADIRAQGGVSRMSDPDMIDGIISAV SIPVMAKARIGHFVEAQILQSLGVDYIDESEVLTPADYANHIDKWKFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGT GDVSNATTHMRTIGGEIRRLTSLSEDELYVAAKELQAPYDLVVEVAKAGKLPVTMFTAGGIATPADAAMMMQLGAEGVFV GSGIFKSGNPAERAAAIVKATTFFDDPDVLAKVSRGLGEAMVGINVDDIPVPHRLAERGW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pdxS | YP_005137204.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 5e-115 | 84 |
| DIP0227 | NP_938620.1 | pyridoxal biosynthesis lyase PdxS | Not tested | Not named | Protein | 4e-115 | 84 |
| pdxS | YP_005141805.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 5e-115 | 84 |
