Gene Information

Name : ROP_61390 (ROP_61390)
Accession : YP_002783331.1
Strain : Rhodococcus opacus B4
Genome accession: NC_012522
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 6714768 - 6716291 bp
Length : 1524 bp
Strand : +
Note : -

DNA sequence :
ATGACCGTGTATGCCCGCCCGGGTTCGCCCGACGCCGTCATGTCCTTCCAATCGCGTTACGACAACTGGATCGGCGGCCA
GTGGGTTGCGCCCGTCAAGGGCCAGTACTTCGAGAATCCGACCCCCGTCACCGGGCAGCCGTTCTGCGAGGTCGCGCGGT
CGACGTCCGAGGACATCGAACTCGCCCTCGACGCCGCACATGCCGCGGCTCCGGCCTGGGGCAAGACGTCGGTCGCCGAG
CGCGCCATCATCCTGAACAAGATCGCGGACCGTATCGAGGAGAACCTCGAGTCCATCGCGCTCGCCGAGTCCTGGGACAA
CGGCAAGCCGATCCGCGAGACCCTGAACGCCGACATCCCGTTGGCGATCGACCACTTCCGCTACTTCGCCGGCGCGATCC
GCGCGCAGGAAGGCGCCCTGTCGGAGATCGACTCCGACACCGTCGCCTACCACTTCCACGAGCCGCTCGGCGTCGTCGGC
CAGATCATCCCCTGGAACTTCCCGATTCTGATGGCCGTGTGGAAGCTCGCCCCCGCACTCGCCGCAGGCAACGCGGTCGT
CCTCAAGCCCGCCGAGCAGACCCCGGCGTCGATCCTGCACCTGATCTCCGTCATCGGCGACCTGCTGCCCGCCGGTGTGG
TGAACATCGTCAACGGTTTCGGTGTCGAGGCGGGCAAGCCGCTGGCCTCGAGCCCGCGGATTCGGAAGATCGCGTTCACC
GGTGAGACCACCACGGGCCGGCTCATCATGCAGTACGCGTCGCAGAACCTGATCCCCGTCACCCTCGAACTCGGTGGCAA
GAGCCCCAACATCTTCTTCTCCGACGTGCTGTCGTCCAACGACGACTACCAGGACAAGGCGCTCGAAGGCTTCACGATGT
TCGCCCTCAACCAGGGGGAGGTGTGCACCTGCCCGTCGCGTTCGCTGATCCAGGAGGACATCTTCGACGAGTTCCTCGCG
ATGGCCGCGATCCGCACCAAGGCCGTCCGCCAGGGCGACCCGCTCGACACCGACACGATGATCGGCGCGCAGGCGTCCAA
CGATCAGCTCGAGAAGATCCTGTCGTACATCGAGATCGGCAAGGGCGAAGGCGCCAAGGTGATCACCGGTGGCGAGCGCG
CCGAACTGGGCGGCGACCTGTCCGGCGGCTACTACGTGCAGCCGACCATCTTCACCGGTCAGAACAAGATGCGGATCTTC
CAGGAGGAGATCTTCGGTCCCGTCGTGTCCGTCACGTCGTTCAAGGACTACGACCAGGCCATCGAGATCGCCAACGACAC
GCTGTACGGCCTCGGCGCCGGCGTGTGGTCCCGCGACGGCGGCGTCGCCTACCGGGCGGGCCGCGACATCCAGGCCGGCC
GGGTGTGGACCAACACCTACCACCAGTACCCCGCGCACGCCGCGTTCGGTGGCTACAAGCAGTCCGGCATCGGCCGCGAG
AACCACCTGATGATGCTCGAGCACTACCAGCAGACGAAGAACCTGCTGGTCAGCTACGCCCAGAAGGCTCAGGGCTTCTT
CTGA

Protein sequence :
MTVYARPGSPDAVMSFQSRYDNWIGGQWVAPVKGQYFENPTPVTGQPFCEVARSTSEDIELALDAAHAAAPAWGKTSVAE
RAIILNKIADRIEENLESIALAESWDNGKPIRETLNADIPLAIDHFRYFAGAIRAQEGALSEIDSDTVAYHFHEPLGVVG
QIIPWNFPILMAVWKLAPALAAGNAVVLKPAEQTPASILHLISVIGDLLPAGVVNIVNGFGVEAGKPLASSPRIRKIAFT
GETTTGRLIMQYASQNLIPVTLELGGKSPNIFFSDVLSSNDDYQDKALEGFTMFALNQGEVCTCPSRSLIQEDIFDEFLA
MAAIRTKAVRQGDPLDTDTMIGAQASNDQLEKILSYIEIGKGEGAKVITGGERAELGGDLSGGYYVQPTIFTGQNKMRIF
QEEIFGPVVSVTSFKDYDQAIEIANDTLYGLGAGVWSRDGGVAYRAGRDIQAGRVWTNTYHQYPAHAAFGGYKQSGIGRE
NHLMMLEHYQQTKNLLVSYAQKAQGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-148 63
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-155 62
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-155 62
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-155 62
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-154 62
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 5e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROP_61390 YP_002783331.1 aldehyde dehydrogenase VFG0082 Protein 2e-148 63