Gene Information

Name : gabD (ROP_56370)
Accession : YP_002782829.1
Strain : Rhodococcus opacus B4
Genome accession: NC_012522
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.16
Position : 6159483 - 6160958 bp
Length : 1476 bp
Strand : +
Note : -

DNA sequence :
GTGCGGCGCATGATGGACATCATGGATGCAGTCGAACTCATGCGAACCGTCCCCACCACCCTCTTCCTCGGCGGCGAGAA
GTGTGACGCCGAGAACGGCGCCACATTCACCGTTTTCGACCCGGCGACCGGTGACGCCCTCACCGAGGTGGCGGACGCCA
GTCCGGGCGACGCGATGAAGGCGCTCGACGCCGCGGTCGCGGTACAGCGGGAGTGGGCGGCGACACCTGCACGCGAACGT
GGGGAACTGCTGCGCGCGGTGTTCGAGAAGATCACCGCCCGGGCCGACGACTTCGCGCTGCTGATGACGCTGGAGATGGG
CAAGGCGCTGCCGGAGAGCGCGGCGGAGGTCAAGTACGGCGCCGAATTCTTCCGCTGGTTCAGCGAGGAAGCCGTGCGTA
TCGCCGGACGCTACACCCCGGCACCCGCGGGGAACGGGCGCATCCTGGTGACCAAGCAGCCCGTCGGGCCGTGTCTCGCG
ATCACGCCGTGGAACTTCCCGCTCGCGATGGGCACCCGCAAGATCGGGCCGGCCCTGGCCGCCGGCTGCACGATGATCGT
CAAACCCGCCTCCGAGACCCCGCTGACGATGCTCCTCCTCGCCGAGGTGATGGCCGACGCGGGACTGCCGAAGGGCGTGC
TGTCCGTGCTGCCGACGTCCAAGTCCGGCGAGGTGACCGGTCCGCTGATCGACGACCCGCGACTGCGGAAGCTCACGTTC
ACGGGCTCGACCGGGGTGGGCCGCATGCTCGTCGAGAAGTCGGCGAAGGGACTGCTGCGGACGTCGATGGAACTCGGCGG
GAACGCGCCCTTCGTGGTCTTCGACGACGCGGACGTCGACAAGGCGGTGGCGGGCGCCCTCCTCGCCAAGATGCGCAACG
GCGGCGAGGCCTGCACCGCGGCCAATCGCTTCCACGTCGCGAACAGTGTGCGGGAGGAGTTCACCGCGAAACTCGTCGAC
AAGCTGTCCTCGTACAAGCTCGGACCCGGGACCGATCCCGACACGACCCTCGGCCCGCTGATCAACGCGGACCAGCTCGA
GAAGGTCGGAGAACTGGTGCAGGACGCCGTCGGCGCGGGTGCCCGGGTGCGGCTCGGTGGCGTGGCCCCGGAAGGTCCCG
GCTATTTCTATCCGGCGACGGTGCTGGACGCGATTCCCGCCCAGGCCCGGATCCTGAAGGAGGAGGTGTTCGGTCCGGTG
GTCGCGATCGCCGGATTCGACACCGAGGAGGAGGGGATCGCCGCGGCCAACGACACGGAGTTCGGCCTGGCGGCGTACAT
CTTCACCCGCGATCTGGATCGTGCGCTCCGGGTGGCCGACGCCCTCGAATCGGGCATGGTCGGGGTGAACCGCGGAGTCA
TCTCGGACACCGCTGCCCCCTTCGGCGGCGTCAAAGCGTCGGGCTTCGGGCGCGAAGGGGGCAGTGAAGGCATCGAGGAG
TACCTGGAGACCAAGTACGTGGCACTCGAACCGTGA

Protein sequence :
MRRMMDIMDAVELMRTVPTTLFLGGEKCDAENGATFTVFDPATGDALTEVADASPGDAMKALDAAVAVQREWAATPARER
GELLRAVFEKITARADDFALLMTLEMGKALPESAAEVKYGAEFFRWFSEEAVRIAGRYTPAPAGNGRILVTKQPVGPCLA
ITPWNFPLAMGTRKIGPALAAGCTMIVKPASETPLTMLLLAEVMADAGLPKGVLSVLPTSKSGEVTGPLIDDPRLRKLTF
TGSTGVGRMLVEKSAKGLLRTSMELGGNAPFVVFDDADVDKAVAGALLAKMRNGGEACTAANRFHVANSVREEFTAKLVD
KLSSYKLGPGTDPDTTLGPLINADQLEKVGELVQDAVGAGARVRLGGVAPEGPGYFYPATVLDAIPAQARILKEEVFGPV
VAIAGFDTEEEGIAAANDTEFGLAAYIFTRDLDRALRVADALESGMVGVNRGVISDTAAPFGGVKASGFGREGGSEGIEE
YLETKYVALEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 2e-106 49
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 3e-88 47