Name : gabD (ROP_56370) Accession : YP_002782829.1 Strain : Rhodococcus opacus B4 Genome accession: NC_012522 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 6159483 - 6160958 bp Length : 1476 bp Strand : + Note : - DNA sequence : GTGCGGCGCATGATGGACATCATGGATGCAGTCGAACTCATGCGAACCGTCCCCACCACCCTCTTCCTCGGCGGCGAGAA GTGTGACGCCGAGAACGGCGCCACATTCACCGTTTTCGACCCGGCGACCGGTGACGCCCTCACCGAGGTGGCGGACGCCA GTCCGGGCGACGCGATGAAGGCGCTCGACGCCGCGGTCGCGGTACAGCGGGAGTGGGCGGCGACACCTGCACGCGAACGT GGGGAACTGCTGCGCGCGGTGTTCGAGAAGATCACCGCCCGGGCCGACGACTTCGCGCTGCTGATGACGCTGGAGATGGG CAAGGCGCTGCCGGAGAGCGCGGCGGAGGTCAAGTACGGCGCCGAATTCTTCCGCTGGTTCAGCGAGGAAGCCGTGCGTA TCGCCGGACGCTACACCCCGGCACCCGCGGGGAACGGGCGCATCCTGGTGACCAAGCAGCCCGTCGGGCCGTGTCTCGCG ATCACGCCGTGGAACTTCCCGCTCGCGATGGGCACCCGCAAGATCGGGCCGGCCCTGGCCGCCGGCTGCACGATGATCGT CAAACCCGCCTCCGAGACCCCGCTGACGATGCTCCTCCTCGCCGAGGTGATGGCCGACGCGGGACTGCCGAAGGGCGTGC TGTCCGTGCTGCCGACGTCCAAGTCCGGCGAGGTGACCGGTCCGCTGATCGACGACCCGCGACTGCGGAAGCTCACGTTC ACGGGCTCGACCGGGGTGGGCCGCATGCTCGTCGAGAAGTCGGCGAAGGGACTGCTGCGGACGTCGATGGAACTCGGCGG GAACGCGCCCTTCGTGGTCTTCGACGACGCGGACGTCGACAAGGCGGTGGCGGGCGCCCTCCTCGCCAAGATGCGCAACG GCGGCGAGGCCTGCACCGCGGCCAATCGCTTCCACGTCGCGAACAGTGTGCGGGAGGAGTTCACCGCGAAACTCGTCGAC AAGCTGTCCTCGTACAAGCTCGGACCCGGGACCGATCCCGACACGACCCTCGGCCCGCTGATCAACGCGGACCAGCTCGA GAAGGTCGGAGAACTGGTGCAGGACGCCGTCGGCGCGGGTGCCCGGGTGCGGCTCGGTGGCGTGGCCCCGGAAGGTCCCG GCTATTTCTATCCGGCGACGGTGCTGGACGCGATTCCCGCCCAGGCCCGGATCCTGAAGGAGGAGGTGTTCGGTCCGGTG GTCGCGATCGCCGGATTCGACACCGAGGAGGAGGGGATCGCCGCGGCCAACGACACGGAGTTCGGCCTGGCGGCGTACAT CTTCACCCGCGATCTGGATCGTGCGCTCCGGGTGGCCGACGCCCTCGAATCGGGCATGGTCGGGGTGAACCGCGGAGTCA TCTCGGACACCGCTGCCCCCTTCGGCGGCGTCAAAGCGTCGGGCTTCGGGCGCGAAGGGGGCAGTGAAGGCATCGAGGAG TACCTGGAGACCAAGTACGTGGCACTCGAACCGTGA Protein sequence : MRRMMDIMDAVELMRTVPTTLFLGGEKCDAENGATFTVFDPATGDALTEVADASPGDAMKALDAAVAVQREWAATPARER GELLRAVFEKITARADDFALLMTLEMGKALPESAAEVKYGAEFFRWFSEEAVRIAGRYTPAPAGNGRILVTKQPVGPCLA ITPWNFPLAMGTRKIGPALAAGCTMIVKPASETPLTMLLLAEVMADAGLPKGVLSVLPTSKSGEVTGPLIDDPRLRKLTF TGSTGVGRMLVEKSAKGLLRTSMELGGNAPFVVFDDADVDKAVAGALLAKMRNGGEACTAANRFHVANSVREEFTAKLVD KLSSYKLGPGTDPDTTLGPLINADQLEKVGELVQDAVGAGARVRLGGVAPEGPGYFYPATVLDAIPAQARILKEEVFGPV VAIAGFDTEEEGIAAANDTEFGLAAYIFTRDLDRALRVADALESGMVGVNRGVISDTAAPFGGVKASGFGREGGSEGIEE YLETKYVALEP |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-106 | 49 |
orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-88 | 47 |