Gene Information

Name : ROP_55290 (ROP_55290)
Accession : YP_002782721.1
Strain : Rhodococcus opacus B4
Genome accession: NC_012522
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5438
EC number : -
Position : 6039763 - 6041064 bp
Length : 1302 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGAATTCCACGGACACGGCCACGGACACGGCCACGGCCACAGCGACGGACCGGCCCCGATGGGCCCCGTCGCCGC
CAAGGTGGTGGTCGGGCTCCTCGTCGCCATCGGTGTCGCGGTGCTCATCGGCGCCGTCGCGTTGTGGCCCGGCAAGCCGA
GCGTCGACGTCGAACAGCCGTTCCAGAGCGCGCAGGGCGGCGCGGTCGTCACGGAGTCGGGCACGGTCACGATGCAGAAC
ATCGGCGACTGCGGAAGTCCGTCGGCCGGACGCGTCTTCACCGGCTCCCCTCTGCCCCCGCCCGCCGGCGCCTACGAGTG
CCAGCGCAGCATCGTCGACATCGAGTCCGGCCCCAACACCGGCACCCAGACGCTGCTCGAGATCATCCCCGGACCCGGCC
AGCCCGACCTCCGGGTGGGTGAGGACATCCGGCTGTCCCGCCAGACGGATGTGAACGGCACGACGGAGTACTCGTTCGAG
GACTACGCGCGCGGTCTGCCCGTCACCCTCATCGCTCTCGCGTTCGCGGTCGTCGTCATCGTGGTCGCGCGGTGGCGCGG
GTTCCGGGCGCTCGTCGGCATCGTCGTCTCGTTCGGCGTGCTCGTCCTGTTCACGCTCCCGGCACTGCTGGACGGACAAC
CGGCGATCCCGGTGGCGCTCGTGTCCGGCGCCGTCATCCTGTATGCCGTGCTGTATCTCGCGCACGGCGTGTCACTGCGC
ACCAGTTCGGCGTTGCTGGGCACCCTCGCGTCGATGGCCCTGGCAGCGGTCCTCTCCTGGGCCACCATCGAAATGACGCG
CCTGACCGGGCTGTCCGAGGAGCAGAACACCAACGTCCAGACGTACATCCAGCACGTCAGCATCACCGGCCTGCTGCTGG
CCGGCTTCATCATCGGCTCGCTGGGTGTGCTCAACGACGTCACCATCACGCAGGCGGCGTCGGCGTTCGAACTGGCCTCG
CTCGACCCGGACGCGTCGAGGCGACAGATCTTCGGTTCGGCGATGCGCGTCGGCCGCGATCACATCGCCAGCACCGTGTA
CACCCTCGTGCTGGCGTATGCCGGCGGGGCGCTGCCGCTGCTGTTGCTGTTCAGTGTGGCGGGCCGGTCGATCCAGGACG
TGCTGCTCAGCGACGCGGTGGCCATCGAGATCGTGCGTTCCGCGGTCGGTGGCATCGCCCTGGCGCTGTCGGTGCCGCTG
ACCACCGCGATCGCGGTGATGCTGGCGCGCCCGATCGGCGCGGGTACCAGCGGCACTGCGCCCGCGGTCAGGCCGTCACG
GGGTGGCCGGCACTCCAAGTAG

Protein sequence :
MSEFHGHGHGHGHGHSDGPAPMGPVAAKVVVGLLVAIGVAVLIGAVALWPGKPSVDVEQPFQSAQGGAVVTESGTVTMQN
IGDCGSPSAGRVFTGSPLPPPAGAYECQRSIVDIESGPNTGTQTLLEIIPGPGQPDLRVGEDIRLSRQTDVNGTTEYSFE
DYARGLPVTLIALAFAVVVIVVARWRGFRALVGIVVSFGVLVLFTLPALLDGQPAIPVALVSGAVILYAVLYLAHGVSLR
TSSALLGTLASMALAAVLSWATIEMTRLTGLSEEQNTNVQTYIQHVSITGLLLAGFIIGSLGVLNDVTITQAASAFELAS
LDPDASRRQIFGSAMRVGRDHIASTVYTLVLAYAGGALPLLLLFSVAGRSIQDVLLSDAVAIEIVRSAVGGIALALSVPL
TTAIAVMLARPIGAGTSGTAPAVRPSRGGRHSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1919 YP_005684272.1 hypothetical protein Not tested PiCp 7 Protein 1e-52 44
cpfrc_01930 YP_003784330.1 hypothetical protein Not tested PiCp 7 Protein 1e-52 44
CpI19_1940 YP_005686364.1 hypothetical protein Not tested PiCp 7 Protein 1e-52 44
Cp1002_1925 YP_005682180.1 hypothetical protein Not tested PiCp 7 Protein 1e-52 44