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Name : gabD (ROP_44580) Accession : YP_002781650.1 Strain : Rhodococcus opacus B4 Genome accession: NC_012522 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 4805291 - 4806739 bp Length : 1449 bp Strand : - Note : - DNA sequence : ATGCTCGAGGAAGCAGCAATCGCATCCGTACAGACCGGCCTCTTCATCGGCGGCAAATGGCGCGACAGCGCCCGCACCAT GCCGGTCCACGACCCGTCCACCGGACAGATCCTGTGCACGGTCGCCGACGCCGACGCGTCGGAGGCACGGGAGGCGCTGG ACGCAGCGGTCGCGGCGCAACCGTCGTGGGCGGACACCACCCCCCGCGAGCGCAGCACCATCCTCATGAACGCGCACCGG TTGCTGCTCGAGAACGTCGACCGGCTCGCGCTCGTCATGACACTGGAGATGGGCAAGCCACTCACCGAGGCCCGCGGCGA AATCGCCTACGCCGCAGAGTTCTTCCGCTGGTTTGCCGAAGAAGCCGTCCGTATCGACGGCGGCTACATGACGGCGCCGG GCGGCGGGTCGCGATTCCTCGTCACCAAACAGCCCGTCGGGCCGAGCCTGCTCATCACCCCGTGGAACTTCCCGATGGCG ATGGGCACCCGCAAGATCGGGCCCGCGATCGCCGCCGGCTGCACGTCCGTCATCAAACCGGCGGCGCAGACTCCGCTGTC GATCCTGGCGCTCGCCGACATCCTCACCGAGGCCGGACTTCCGGACGGCGTCGTCAACGTCGTCACCACGTCCAGCCCGG ACGAGGTGATCACTCCCCTGATCCTCGACGGCCGGGCCCGCAAGCTGTCGTTCACCGGTTCGACGAAGGTCGGGAAGCAT CTGCTCGAACTGTGCGCCCGCACGGTCATGCGCACGTCCATGGAACTCGGCGGCAACGCGCCGTTCCTCGTGTTCGAGGA CGCGAACCTCGACGACGCCGTCGACGGCGCCATGGCCGCGAAGATGCGCAACATCGGCCAGGCCTGCACGGCCGCCAACC GCATCCTCGTGCACAGTTCGGTGGCCGAGGAATTCACCCGCAAGCTCACCCAGCGGATGGAGGCGCTGCCGGTCGGTCGC GGCACCGAGGACGGCGTCGTCGTCGGACCGCTCATCGACGAGGCCGCCGTCGCCAAGGTGGGCAGCCTCGTCGCCGATGC CGTCGAACGCGGGGCGTCGGTGCTCACCGGCGGCGCGGCACTCGACCGGCCGGGCAACTTCTACCCGGCGACGGTGCTCA CGGGCGTGCCCGACGACGCCGAGATGTGCCACAACGAGATCTTCGGTCCGGTGGCCGCGATCAGCACGTTCGAGACCGAG GCCGAGGCCGTCGAACGGGCCAACGACACCCCGTACGGGCTGGTGGCGTACGTGTACACCGAGAGCCTCAAGCGCGGCAT CCGCGTGTGCGAGGCGCTGGAATCGGGGATGGTCGGACTCAACCAGGGCGTGGTGTCGAACCCGGCGGCGCCGTTCGGCG GCGTGAAGGAATCCGGACTCGGGCGCGAAGGCGGGACCACCGGCATCGACGAATTCCTCGAGACCAAGTACATCGGCGTC GCCGTCTAG Protein sequence : MLEEAAIASVQTGLFIGGKWRDSARTMPVHDPSTGQILCTVADADASEAREALDAAVAAQPSWADTTPRERSTILMNAHR LLLENVDRLALVMTLEMGKPLTEARGEIAYAAEFFRWFAEEAVRIDGGYMTAPGGGSRFLVTKQPVGPSLLITPWNFPMA MGTRKIGPAIAAGCTSVIKPAAQTPLSILALADILTEAGLPDGVVNVVTTSSPDEVITPLILDGRARKLSFTGSTKVGKH LLELCARTVMRTSMELGGNAPFLVFEDANLDDAVDGAMAAKMRNIGQACTAANRILVHSSVAEEFTRKLTQRMEALPVGR GTEDGVVVGPLIDEAAVAKVGSLVADAVERGASVLTGGAALDRPGNFYPATVLTGVPDDAEMCHNEIFGPVAAISTFETE AEAVERANDTPYGLVAYVYTESLKRGIRVCEALESGMVGLNQGVVSNPAAPFGGVKESGLGREGGTTGIDEFLETKYIGV AV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 6e-92 | 48 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 3e-97 | 48 |
