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Name : serS (ROP_39200) Accession : YP_002781112.1 Strain : Rhodococcus opacus B4 Genome accession: NC_012522 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 4225271 - 4226527 bp Length : 1257 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : GTGATTGACCTGAAGTTCCTCCGCGAGAACCCCGACGCCGTCCGCGAATCGCAGCGCACCCGTGGCGAAGATCCCGCCCT GGTCGACGCGTTGCTCGAGGCCGACGCGTCCCGTCGCGCCGCCGTTCTCGCCGGCGACAACCTGCGTGCCGAGCAGAAGG CGTTCGGCAAGAAGGTCGGGCAGGCGTCCCCGGAGGAGCGCCCGGCGCTGCTCGAGGGATCCAAGGAACTCGCGGCCAAG GTGAAGCAGGCCGAGGCCGGCCAGCACGAGGCGCAGGCCGCGCTCGACGCCGCACACCGGGCGATCTCCAACATCGTCCA GGACGGCGCCCCCGCCGGCGGTGAGGACGACTTCATCACCCTCGAGACGGTCGGGGAGATCCCCGCATTCGACTTCGAAC CCAAGGACCACCTCGAGCTGGGTGAGTCGCTGGGGCTGATCGACATGGAGCGCGGCGCGAAGGTGTCAGGCGCCCGCTTC TACTTCCTCACCGGCTTCGGTGCCATGCTGCAGCTGGGAATGCTGCAGCTCGCCGCACAGAAGGCGATGGCCAACGGTTT CCAGATGATGATCCCGCCGGTGCTGGTGCGCCCGGAGATCATGGCGGGAACCGGGTTCCTCGGCGCCCACTCGGACGAGA TCTACCACCTCGCCGACGACGACCTCTACCTCGTCGGCACGTCCGAGGTCCCGCTGGCCGGGTACCACTCCGGGGAGATC CTCGACCTCGCCGACGGCCCCAAGCGGTACGCCGGCTGGTCGACGTGCTTCCGCCGCGAGGCAGGCAGCTACGGCAAGGA CACCCGCGGCATCATCCGCGTCCACCAGTTCGACAAGGTGGAGATGTTCACCTACTGCAAGCCCGAGGACGCCGACGCCG AGCACCAGCGCCTCCTCGCGTGGGAGCGCGACATGCTCGCCGCCATCGACGTGCCGTACCGCGTGATCGACGTGGCCGGC GGCGACCTGGGATCGTCGGCGGCCCGCAAGTTCGACTGCGAGGCGTGGGTGCCGACGCAGCAGGCGTACCGGGAGCTCAC GTCGACGTCCAACTGCACGACGTTCCAGGCGCGTCGCCTCGGGGTGCGGTACCGCGACGAGAACGGGAAGCCGCAGACGG CCGCGACCCTCAACGGCACCCTCGCCACTACCCGGTGGATCGTCGCCATCCTGGAGAACCACCAGCAGTCCGACGGCACA GTGCGGGTGCCCGAGGCGCTCGTGCCGTTCGTCGGGACGGATGTTCTGAAACCGTGA Protein sequence : MIDLKFLRENPDAVRESQRTRGEDPALVDALLEADASRRAAVLAGDNLRAEQKAFGKKVGQASPEERPALLEGSKELAAK VKQAEAGQHEAQAALDAAHRAISNIVQDGAPAGGEDDFITLETVGEIPAFDFEPKDHLELGESLGLIDMERGAKVSGARF YFLTGFGAMLQLGMLQLAAQKAMANGFQMMIPPVLVRPEIMAGTGFLGAHSDEIYHLADDDLYLVGTSEVPLAGYHSGEI LDLADGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEMFTYCKPEDADAEHQRLLAWERDMLAAIDVPYRVIDVAG GDLGSSAARKFDCEAWVPTQQAYRELTSTSNCTTFQARRLGVRYRDENGKPQTAATLNGTLATTRWIVAILENHQQSDGT VRVPEALVPFVGTDVLKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-60 | 41 |
