Gene Information

Name : ROP_32630 (ROP_32630)
Accession : YP_002780455.1
Strain : Rhodococcus opacus B4
Genome accession: NC_012522
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 3501736 - 3502461 bp
Length : 726 bp
Strand : +
Note : -

DNA sequence : 
ATGGCCGTCTCTCTCACTGGAACCAACCTGCACCTCGCGTTCGGCACCAACCAGGTGCTGCGCGGCGTCGACCTCCACGT
CGACGCCGGCGACACCGTCACCGTGATCGGACCGTCCGGCTCCGGCAAGTCCACCCTGCTGCGCGTCCTCAACCGGCTGC
ACGAACCCGACCAGGGCGACGTCCTCCTCGACGGCAAATCGGTGCTGAAGGACAACCCCGACAAGCTGCGGCAGCGCATC
GGCATGGTGTTCCAGCACTTCAACCTGTTCCCGCACAGGACCGTCGTCGACAACATCGCGCTCGGGCCCCGCAAGCTCAA
GGGCCTGTCGAAGGACGAGGCGCGGTCGCTGGCGCTCGAGCAGCTCGAACTCGTCGGGCTCGCCAACAAGGCCGACTCCC
GGCCCGGCAACCTGTCGGGCGGGCAGCAGCAGCGCGTCGCGATCGCCCGCGCGCTGGCGATGAAGCCCGAGGTGATGTTC
TTCGACGAGGCCACGTCCGCACTCGACCCCGAACTGGTGAAGGGCGTCCTCGCCCTGATGGCCGACCTCGCCAAGGGCGG
AATGACGATGGTCGTCGTCACCCACGAGATGGGCTTCGCCCGCGAAGTGTCCGACACCGTGCTGTTCATGGACCACGGTG
CCGTGGTCGAGACCGGTAAACCGGACCAGCTGTTCGACAAGCCCGAAACCGAACGGCTGCAGCAGTTCCTGTCGCAGGTG
CTGTAG

Protein sequence : 
MAVSLTGTNLHLAFGTNQVLRGVDLHVDAGDTVTVIGPSGSGKSTLLRVLNRLHEPDQGDVLLDGKSVLKDNPDKLRQRI
GMVFQHFNLFPHRTVVDNIALGPRKLKGLSKDEARSLALEQLELVGLANKADSRPGNLSGGQQQRVAIARALAMKPEVMF
FDEATSALDPELVKGVLALMADLAKGGMTMVVVTHEMGFAREVSDTVLFMDHGAVVETGKPDQLFDKPETERLQQFLSQV
L

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-23 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 9e-30 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROP_32630 YP_002780455.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-27 44
ROP_32630 YP_002780455.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-29 43