|
Name : ROP_31110 (ROP_31110) Accession : YP_002780303.1 Strain : Rhodococcus opacus B4 Genome accession: NC_012522 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.3 Position : 3347113 - 3348576 bp Length : 1464 bp Strand : - Note : - DNA sequence : ATGTCCGAGACCAGCCCCAGCCGTCATCAACTGCTGATCGACGGTAAGTGGGTGGATCCGGTCGAAGGCGGCACTGTCGA CGTCTTCAACCCGTCGACCGGAGAAAAGCTCGCCGAGATCGCCGCAGGCGGCCCGCGCGACGTCGAACTGGCGGTGCAGG CTGCCCGCCGCGCATTCGACGACGGCCCGTGGCGGCGGATGCCGGCCGAGGCCCGCGCCCGGATCCTGCACCGCTTCGCG GACCTCATCGAGGCCAACGCGGACGAGATCGCCCTCGTCGACACCCAGGACTGCGGAAAGCCCTACGCGTTCATCCGCGA CATCGACCTGCCGAACATGGCCGACCTGCTGCGCTACATGGCCGGGTGGACCACCAAGCTCGAGGGACGCACCATCCCGC TGTCGCGGCAGAACCCCGGCGACTTCTTCTCCTACACCCGGCGGCAGCCGGTCGGCGTCGTCGCGCAGATCATCCCCTGG AACGGCGCCGCACTCGCCGCGATCTGGAAGCTCGCCCCGGCGCTCGCCGCCGGATGCACCGTGGTGCTCAAACCCGCCGA ACTCGCCTCCCTGGCGCCGCTGCGCCTGGCGGAGTTGGCTGTCGAAGCCGGTGTGCCCGACGGAGTGGTCAACGTGATCA CCGGAACGGGCGCGGACGCCGGTGCTCCGTTGGCCGGTCACCCGCAGGTCGACAAGGTTGCGTTCACCGGCTCGGTCGAG ACCGGCAAGAGGATCGTCGTCGCGGCCGCATCGAACCTGAGCAAGCTGACCCTCGAACTCGGCGGCAAATCCCCCAATGT CATCTACGACGACGCCGATCTCGACATCGCCGTCGACGGAGTGCTCGGTGCCGTCCTCTACGCCCAGGGTGAGGCCTGCA CGGCCGGGTCGCGGCTGTATGTGCAGCGCAACGTCTACGACGAGGTCCAGACCCGTATCGCCGCCAAGGTGCCGCAGATC AAGATCGGCCCCAGCGCCGAGCGCGGTGTGCTGGTCGGCCCGATGATCTCCGACCAGCACCGCTCCAAGGTCAAGACCTT CGTCGAGGGCGCGCTCGGTGACGGAGCCGAAATTATTGCCGGTGGTGCCCAGACCCGTGAGCCTGGCTACTACCTCGAAC CGACCGTGCTCGGTGGGGTCGATGACGGCATGACCATCGCCCGGGAGGAGATCTTCGGCCCGGTGGTGTCGCTGATGCCG TTCGACGACGAAGCGGAGGTGTTGCGCCGCGCGAACGACACCACCTACGGTCTGGCGGCCGGAGTGTGGACGAGCAACGT CGGTCGCGCCCACCGCTTCGCCGAGGCGGTCAACGCCGGTGCGGTCTGGGTCAACTGCTACAACGTATTCGACGCCGCGC TGCCGTTCGGCGGCTTCAAGCAGTCCGGTTGGGGTAAGGAGATGGGCGGCGAAGCCCTCGACGGCTACCTGCAGAGCAAG GCGGTCACCGTCTCGCTCGTCTGA Protein sequence : MSETSPSRHQLLIDGKWVDPVEGGTVDVFNPSTGEKLAEIAAGGPRDVELAVQAARRAFDDGPWRRMPAEARARILHRFA DLIEANADEIALVDTQDCGKPYAFIRDIDLPNMADLLRYMAGWTTKLEGRTIPLSRQNPGDFFSYTRRQPVGVVAQIIPW NGAALAAIWKLAPALAAGCTVVLKPAELASLAPLRLAELAVEAGVPDGVVNVITGTGADAGAPLAGHPQVDKVAFTGSVE TGKRIVVAAASNLSKLTLELGGKSPNVIYDDADLDIAVDGVLGAVLYAQGEACTAGSRLYVQRNVYDEVQTRIAAKVPQI KIGPSAERGVLVGPMISDQHRSKVKTFVEGALGDGAEIIAGGAQTREPGYYLEPTVLGGVDDGMTIAREEIFGPVVSLMP FDDEAEVLRRANDTTYGLAAGVWTSNVGRAHRFAEAVNAGAVWVNCYNVFDAALPFGGFKQSGWGKEMGGEALDGYLQSK AVTVSLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 8e-67 | 43 |
| unnamed | AAK01506.1 | putative aldehyde dehydrogenase | Not tested | PAGI-1 | Protein | 1e-79 | 42 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-69 | 42 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 7e-72 | 42 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 7e-72 | 42 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 7e-72 | 42 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 8e-72 | 42 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 7e-75 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ROP_31110 | YP_002780303.1 | aldehyde dehydrogenase | VFG0082 | Protein | 6e-70 | 42 |
