|
Name : ROP_30750 (ROP_30750) Accession : YP_002780267.1 Strain : Rhodococcus opacus B4 Genome accession: NC_012522 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.3 Position : 3312272 - 3313747 bp Length : 1476 bp Strand : - Note : - DNA sequence : ATGCAGACTTACCTGCTCCACATCGACGGGCAACGGCGCCCGTCCGCCGACGACACGTACTTCGAGACGGACAACCCCTA CACCGGCCGGCCCTGGGCACAGATCGCGCGCGGGCAGGCTCAGGATGTCGAGGACGCCGTCCAGGCCGCGCACCGTGCCA TGACCACCGGGCCGTGGGCGGGCATGAGTCCCAGCGCTCGTGGGCTCGTCCTCCAACGCATCGCGGATGCCCTCGAGGAC AACGCCGAACTGCTTGCCCGCACCGAGGTCCGCGACAACGGCAAGCTCTACAGTGAGATGCTCGGCCAGTGCCGGTATCT CGCGCAGTGGTACCGCTACTACGGCGGACTTGCCGACAAGATCGAAGGCCGCGTCGTTCCCGTCGACAAGCCGGGATACT TCACCTACACCCGGCGCGAGCCGATCGGGGTTGTCGGGATCATCACCCCGTGGAATTCGCCGCTGCTGCTGCTCACCTGG AAACTGGCGCCGGCGCTGGCGGCCGGGTGCTCGGTGGTGGTCAAACCGTCCGAGTACACCTCCGCCTCCACTCTCGAATT CGTGCGTATTCTCGAGCAGGCGGGTCTGCCGGCCGGTGTGGTCAACGTGGTCACCGGTTTCGGCCCCGACGTGGGCAGTC CCCTGGTCGACCACCCACTGGTCCGCAAGGTCGGCTTCACTGGGTCGGACGCCACCGGACGGCACATCGGAGCCGCGGCC GCGCGCGGACTCAAGCGGGTGTCCCTCGAACTCGGCGGCAAGTCACCGAACATCGTCTTCGCCGACGCCGATCTCGATGC CGCGGTCAACGGCGCGGTGTCCGGCATCTTCGCCGCAACCGGTCAGACCTGCATCGCCGGAAGCCGCCTTCTGGTACAGC GATCCGTGCACGAGGAGGTTGTTGCCAAGCTGGTCGCGCTCGCCTCGACCGCCCGGATCGGAGACCCGATGGACCCCGAC ACCCAGGTGGGGCCGATCACCACTCGGGACCAGTACAAGAAGGTTCTCGAGTACATCGACATCGCCGCCGCCGAAGGCGC ACACCTCGCGCTCGGCGGGGCGGCGGCCACCGACACCGGAACCGACGGGTGGTTCGTACAGCCGACCGTGTTCACCGGGG TGCGCAATCAGTCGCGGCTCGCGCAAGAGGAGGTCTTCGGACCGGTGCTCGCGGTGATCCCGTTCGACACCGAAGACGAG GCGGTCGCCATCGCCAACGATTCGAAATACGGTCTCGGCGCCGGTGTCTGGACCACCGACCTGCCTCGGGCGTTTCGCAT GGCGGAGGCGATCGAATCGGGAACGGTCTGGGTGAACACCTACCGGGCAGTGAGCTTCATGCTGCCGTTCGGAGGTGTGA AGGACTCCGGTATCGGCCGGGAAAACGGCACCGAGGCAATCGACGAGTACCTCGAAACCAAGAGCGTGTGGATCAACACC GGGGCGCCGACCGGAAACCCGTTCGTCCTGCGCTGA Protein sequence : MQTYLLHIDGQRRPSADDTYFETDNPYTGRPWAQIARGQAQDVEDAVQAAHRAMTTGPWAGMSPSARGLVLQRIADALED NAELLARTEVRDNGKLYSEMLGQCRYLAQWYRYYGGLADKIEGRVVPVDKPGYFTYTRREPIGVVGIITPWNSPLLLLTW KLAPALAAGCSVVVKPSEYTSASTLEFVRILEQAGLPAGVVNVVTGFGPDVGSPLVDHPLVRKVGFTGSDATGRHIGAAA ARGLKRVSLELGGKSPNIVFADADLDAAVNGAVSGIFAATGQTCIAGSRLLVQRSVHEEVVAKLVALASTARIGDPMDPD TQVGPITTRDQYKKVLEYIDIAAAEGAHLALGGAAATDTGTDGWFVQPTVFTGVRNQSRLAQEEVFGPVLAVIPFDTEDE AVAIANDSKYGLGAGVWTTDLPRAFRMAEAIESGTVWVNTYRAVSFMLPFGGVKDSGIGRENGTEAIDEYLETKSVWINT GAPTGNPFVLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 1e-57 | 46 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 5e-60 | 43 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 1e-60 | 43 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 1e-60 | 43 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 1e-60 | 43 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 4e-60 | 43 |
| aldA | ACK75582.1 | aldehyde dehydrogenase | Not tested | VPI | Protein | 4e-37 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ROP_30750 | YP_002780267.1 | aldehyde dehydrogenase | VFG0082 | Protein | 2e-60 | 43 |
