Gene Information

Name : ROP_30430 (ROP_30430)
Accession : YP_002780235.1
Strain : Rhodococcus opacus B4
Genome accession: NC_012522
Putative virulence/resistance : Virulence
Product : ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 3278499 - 3279533 bp
Length : 1035 bp
Strand : -
Note : -

DNA sequence :
GTGGTGGCCACACGGTTCGACTCCCGGCCGCTGCTCGGGGCATGCCTGCTCGGCGGGCTCGCCGTACTGGCGGCGTCGAT
CGCCGTCGTCATCACGATCGGACCCGCCAGCCTGTCCGTCGGCGACGTCTACGCGGTTGTGTTCGAGCGCCTCGGATTCG
GCGCCACCGACATCAGCCGCATCAAAGAGGGCATCGTCTGGGAACTGAGACTGCCCCGCACCCTCCTCGCCGCCGTCTGC
GGCGCGGGACTCGCGCTGTGCGGGGCGATCATGCAGTCGCTGTTGCGGAATCCGCTCGCCGATCCGTTCGTGCTCGGCAT
CTCGTCGGGGGCGTCCACCGGGGCGGTGCTCGTCGCGGTCCTCGGTCTCGGTGCAGGCGCGGTGTCGCTGTCGGCGGGAG
CGTTCGCGGGCGCGGTGATCTCGTTCGCCCTGGTGATGCTGCTCGCTGCCGGCGCAGGCGGCGGTACGTCCCGGGTGGTG
CTCGCGGGAGTGGCTGGGACGCAGCTGTTCTCGGCGTTGACGTCGTTCATCGTGATCTCGTCGGCAGACGCCGAGCAGAC
CCGCGGGGTGCTGTTCTGGCTGCTCGGTTCGCTCTCCGGTGCCGATTGGGCCGACGTCACCCTGTGCGGGGCAGTCACTC
TTGTGGGACTGCTGGTGTGCCTGACCCAGTCGTCGGCGCTGGACGCGTTCACGTTCGGGAACTCCGCGGCCGCCGCACTC
GGGGTGTCTGTGCGATGGATTCGGATCCTCCTGCTGACCATCACCGCACTCGTCACCGCCGCCCTGGTGAGCGCCGCAGG
CGCGATCGGGTTCGTCGGACTGGTCCTGCCGCACGCCGCACGGTTCCTCGTCGGTCCCCGGCACAGCCGGCTGCTCCCCA
CCACCGCCGTGGTCGGTGCCGTCTTCATGGTGTGGGTGGACGCGATCGCCCGCACGGTGTTCGCACCGCAAGAGGTTCCC
GTCGGCGTCGTCACCGCCCTGATCGGCGTTCCGGCCTTCGCCGTCATCCTCTTCCGCATGAGGACCAGCCGATGA

Protein sequence :
MVATRFDSRPLLGACLLGGLAVLAASIAVVITIGPASLSVGDVYAVVFERLGFGATDISRIKEGIVWELRLPRTLLAAVC
GAGLALCGAIMQSLLRNPLADPFVLGISSGASTGAVLVAVLGLGAGAVSLSAGAFAGAVISFALVMLLAAGAGGGTSRVV
LAGVAGTQLFSALTSFIVISSADAEQTRGVLFWLLGSLSGADWADVTLCGAVTLVGLLVCLTQSSALDAFTFGNSAAAAL
GVSVRWIRILLLTITALVTAALVSAAGAIGFVGLVLPHAARFLVGPRHSRLLPTTAVVGAVFMVWVDAIARTVFAPQEVP
VGVVTALIGVPAFAVILFRMRTSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 1e-24 42
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 1e-24 42
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 1e-24 42
CpI19_1928 YP_005686352.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 1e-24 42
CDCE8392_1769 YP_005134303.1 ferrichrome transport system permease protein fhuB Virulence Not named Protein 5e-26 41