Gene Information

Name : ROP_30420 (ROP_30420)
Accession : YP_002780234.1
Strain : Rhodococcus opacus B4
Genome accession: NC_012522
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3277714 - 3278502 bp
Length : 789 bp
Strand : -
Note : -

DNA sequence : 
ATGACGTTGCACGCGAAGAACCTCGGCTGGAGCCGCGGCGGACACCTCGTGCTCGACGGGGTATCCGTGGATCCCGCCGT
CGGCGAAACGATCGGACTGCTCGGCCCCAACGGCTCGGGCAAGTCCTCGCTACTGCGACTGCTCAGCGGGCTCGCGGAAC
CGGGCTCCGGCAGTGTCCTCCTCGACGGCACCGACATCAGGACCCTCCGACGACGGCAGATCGCGCGCCGGGTGGCGATG
GTCGATCAGCATTCCGACACCGAGGTCGACATCACCGTGCTCGACGTGGTCCGACTCGGCCGGATACCGCACCGCGGGGT
CTTCGGCGGCGACGAGTCGGCGGACACCTCGGCCGTCGAGCGGGCGCTCGAGCACACCTGCATGACGTCGAAGTCGCACC
GACTGTGGCACACCCTGTCCGGTGGGGAGCGGCAGCGCGCCCAGATCGCGCGGGCCCTCGCACAGGAACCGGACGAACTG
CTGCTCGACGAACCGACCAACCACCTGGACATCCAGCATCAGCTCGACATCCTGTCCCTGGTGGCGGAACTTCCCCTCAC
CAGTTACATTGCCCTCCACGACCTCAACCTGGCCGCGATGTTCTGCGACCGCGTGGTGGTGCTGAAGGCCGGCCGCATCG
TGGCCGCCGGCCGCCCCGCCGAGGTGATCACCGAGGCCCTCGTCGAGCAGGTGTACAACGTGCGGGCTGGGGTCGCCGTC
GATCCCGTCACCGGCTACCCGACCGTCACGTACCGGCCGCGGTCCTCACGGTATTTCGCCGACCGCTGA

Protein sequence : 
MTLHAKNLGWSRGGHLVLDGVSVDPAVGETIGLLGPNGSGKSSLLRLLSGLAEPGSGSVLLDGTDIRTLRRRQIARRVAM
VDQHSDTEVDITVLDVVRLGRIPHRGVFGGDESADTSAVERALEHTCMTSKSHRLWHTLSGGERQRAQIARALAQEPDEL
LLDEPTNHLDIQHQLDILSLVAELPLTSYIALHDLNLAAMFCDRVVVLKAGRIVAAGRPAEVITEALVEQVYNVRAGVAV
DPVTGYPTVTYRPRSSRYFADR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 3e-30 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-20 42
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROP_30420 YP_002780234.1 ABC transporter ATP-binding protein BAC0164 Protein 9e-21 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROP_30420 YP_002780234.1 ABC transporter ATP-binding protein VFG1042 Protein 8e-21 42
ROP_30420 YP_002780234.1 ABC transporter ATP-binding protein VFG0925 Protein 2e-22 42