Gene Information

Name : ROP_30360 (ROP_30360)
Accession : YP_002780228.1
Strain : Rhodococcus opacus B4
Genome accession: NC_012522
Putative virulence/resistance : Unknown
Product : MFS transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2271
EC number : -
Position : 3268758 - 3270158 bp
Length : 1401 bp
Strand : -
Note : -

DNA sequence :
GTGGTCCACGTCACGTCGCCCGCTCTCCAGAAAGCCGAGGCATTCATGTCGTCCGTACTGCAGAAACCCGAGATCGAGGC
GAGGGTGGTCCGGAAGGTCGCCCGGCGGCTCATTCCGTTCCTCGGCCTGGCCTACTTCGTCAACTACCTCGACCGGACCA
ATATCGGGCTGGCGAAGCTGACCATGAGCGAGGAACTCGGCCTGACCGAGACCATGTTCGGCCTGGCCTCCGGTCTCTTC
TTCATCGGGTATCTCCTGTTCGAGGTGCCGAGCAATCTCGCGCTGCACAGGTTCGGGGCGCGGCGCTGGATCGCCCGGAT
AATGCTCACGTGGGGAATCATCGCGGCGGCCATGGCTTTCGTGCCCAATGTCGGATCGCTGTACACGCTGCGGATGTTGC
TGGGTATCGCCGAGGCCGGCTTCTTCCCCGGCGTCCTGCTCTACCTGACCCTGTGGTTCCCGCGCGCCTACCGGGTGCGG
CTGATGGGTCTGTTCCTTCTCGCGCTGCCGGTGTCGTCGGCGCTCGGAGCACCGTTGTCGAGCGCCATCATCCAATACTG
GGACGGGATCTTCGGACTCTCCGGCTGGCGGGTCATGTTCCTGATCGAGGGAATACCCGCCGTCCTGCTCGCGGTGGTCA
CCTGGTTCTACCTGACGGACCGGCCGTCGCAGGCCGGATGGCTGGATGAAGACGAAAAAGGCTGGCTCACTAGTGAACTC
GAATCCGAGGCCTCGGAATCCGGTTCCCGCATCAGTGGGTCGGTGCGGCGGGCGCTGACGGATTCCCGTGTCTGGATGCT
GGGCCTCGTCTATTTCGGGATCACCTACGGGCTGTACTCGCTCAGCTTCTTCCTGCCCAGCATCGTCGCGGGCTTCCAGA
AGACGTTCGCCACCGACTTCTCGCTGTTCACCACCGGGTTGATCGTCGCGGTTCCGTTCGCGGTCGGCGCCGTCGCAATG
GTGTTGTGGAGCAGGCACTCCGACCGGACAGGTGAGCGGATCTGGCACGTCGCCATGCCCACCCTGATCGGAGCCGTCTC
GATCCCGGTCGCCCTGTACATGCAGTCGCCGCTCACGACGATGATCGCGGTCACCGTCAACGCGGTCGGCGTGTTCTGCG
CACTGCCCGTGTTCTGGTACCTGCCCAGCACGTTCCTGACCGGAGCGGGCGCCGCGGCGGGCATCGCCGTCGTCAACTCG
GTGGGCAACATGAGCGGTTTCGGGGCTCCGTACGTCACCGGGTGGCTGTTCGACGCCACCGGAAACGCACGCGCCGGACT
GTGGGTCGTGGGGGCGGTCATGCTCGTCGCCGTGATCCTGGTTCTCGTGCTCAGGTCCCGCGTAAGTGCCACGTGCAGTA
TCGAAGGCGCCGACAACGGGATGGTCACCGCCGGTCGTTGA

Protein sequence :
MVHVTSPALQKAEAFMSSVLQKPEIEARVVRKVARRLIPFLGLAYFVNYLDRTNIGLAKLTMSEELGLTETMFGLASGLF
FIGYLLFEVPSNLALHRFGARRWIARIMLTWGIIAAAMAFVPNVGSLYTLRMLLGIAEAGFFPGVLLYLTLWFPRAYRVR
LMGLFLLALPVSSALGAPLSSAIIQYWDGIFGLSGWRVMFLIEGIPAVLLAVVTWFYLTDRPSQAGWLDEDEKGWLTSEL
ESEASESGSRISGSVRRALTDSRVWMLGLVYFGITYGLYSLSFFLPSIVAGFQKTFATDFSLFTTGLIVAVPFAVGAVAM
VLWSRHSDRTGERIWHVAMPTLIGAVSIPVALYMQSPLTTMIAVTVNAVGVFCALPVFWYLPSTFLTGAGAAAGIAVVNS
VGNMSGFGAPYVTGWLFDATGNARAGLWVVGAVMLVAVILVLVLRSRVSATCSIEGADNGMVTAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96055.1 major facilitator family transporter Not tested T-PAI Protein 1e-67 45
unnamed AAT96099.1 major facilitator family transporter Not tested T-PAI Protein 1e-67 45
unnamed AAT96228.1 major facilitator family transporter Not tested T-PAI Protein 1e-67 45
unnamed AAT96176.1 major facilitator family transporter Not tested T-PAI Protein 1e-67 45
unnamed AAT96116.1 major facilitator family transporter Not tested T-PAI Protein 1e-69 45