Gene Information

Name : ROP_22240 (ROP_22240)
Accession : YP_002779416.1
Strain : Rhodococcus opacus B4
Genome accession: NC_012522
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 2380448 - 2381956 bp
Length : 1509 bp
Strand : -
Note : -

DNA sequence :
ATGACAGCGACGATCGAACCCAGCCAAGCGGAACTCTTGCCGTCGGTACGGAACTTTCTGTCCGGCACCAAGCGATTCCT
CGTCGGCGGGCAGTGGGTGGAATCGGCGAGCGGCGAGACGTTCGAGACCATCGACCCCGCCAACGGGCAGGTGCTGACCA
CCGTCGCACGCGGTGGCGCCGAGGACGTCGACCGCGCAGTCCGCGCCGCACGCACCGCATTCGACGAGGGCCCGTGGTCC
ACCATGAAGCCCAACGAGCGTGAACGCCTGATCTGGCGGGTCGGCGACATCCTCTCCGAGCGCGCCGAGGAATTCGGACA
GCTCGAGGCGCTGGACAACGGCAAGTCGGCAGGCATCGCTGCCGCCGTCGACGTCGCGTGGTCGGCCGACATCTTCCGCT
ACTTCGCGGGCTGGGCCACCAAGATCGAGGGCAGCACGGTCAACGTGAGCATGCCGTTCGTTCCCGGCGGCCAGTTCCAC
GCGTACACGCTGCGTGAACCCGTCGGTGTCTGCGGACTGATCGTTCCCTGGAACTTCCCGCTGCTGATGGCCGCATTCAA
GCTGGCCCCCGCGCTCGCGGCGGGCAACACGGTGATCCTCAAGCCCGCGGAGCAGACGCCGCTCACCGCGCTCCTGCTCG
GCGAGGTGTTCGAGGAGGCCGGATTCCCGCCCGGCGTCGTCAACATCGTCACCGGCTACGGCGACGCCGGTGCCGCGCTC
TCCGCTCACGACGACGTCGACAAGATCGCGTTCACCGGATCCACCGAGGTCGGCAAGAAGATCGTCGACGCCGCCCGCGG
CAACCTGAAGAAGGTGTCGCTCGAACTAGGCGGCAAGAGCGCCAACGTCGTGTTCGCGGACGCGGACTTCGACGCCGCCG
TCACCGGATCGCTCAACGCCTGGCTGTTCAACCACGGCCAGTGCTGCGTCGCCGGCACCCGGATGTTCGTCGAGGACAGC
ATCTTCGACGACTTCACCGCCGCGGTCGCCGAGGCCGCGAGCCAGGTGAAGATCGGCCCCGGACTCGACCCTGCCACCCA
GCTCGGACCGCTCGTGTCGCAGGAGCAGTTCGACAAGGTCACCGGCTACCTGGCTGCCGGACTCGCCGACGGCGCCCGTG
CCCTCACCGGCGGAAAGCGCTGGGGAGACACCGGCTTCTACGTCGAGCCGACGGTGTTCGTGGACGTGAAGCCCGAATTC
AGCATCGTCGAGGAAGAGATCTTCGGCCCGGTCGTCGCGGCGCTGCCCTTCAACGCGGAGGAGGGAGTCGCGAAGGCGGC
GAACAGCAGTATCTACGGTCTCGCCGCCGGAATCTGGACCAAGGACCTGTCCAAGGCGCACCTCACCGCCCGCCAGCTCA
AGGCCGGATCGGTGTGGATCAACCAGTACAACGGGTTCGACACCGCCATGCCGTTCGGTGGATACAAGCAGTCCGGGTGG
GGGCGTGAACTCGGGGCCACCGCCATCGACCTCTACACCCAGACCAAAGCCGTCAACATCGCACTCTGA

Protein sequence :
MTATIEPSQAELLPSVRNFLSGTKRFLVGGQWVESASGETFETIDPANGQVLTTVARGGAEDVDRAVRAARTAFDEGPWS
TMKPNERERLIWRVGDILSERAEEFGQLEALDNGKSAGIAAAVDVAWSADIFRYFAGWATKIEGSTVNVSMPFVPGGQFH
AYTLREPVGVCGLIVPWNFPLLMAAFKLAPALAAGNTVILKPAEQTPLTALLLGEVFEEAGFPPGVVNIVTGYGDAGAAL
SAHDDVDKIAFTGSTEVGKKIVDAARGNLKKVSLELGGKSANVVFADADFDAAVTGSLNAWLFNHGQCCVAGTRMFVEDS
IFDDFTAAVAEAASQVKIGPGLDPATQLGPLVSQEQFDKVTGYLAAGLADGARALTGGKRWGDTGFYVEPTVFVDVKPEF
SIVEEEIFGPVVAALPFNAEEGVAKAANSSIYGLAAGIWTKDLSKAHLTARQLKAGSVWINQYNGFDTAMPFGGYKQSGW
GRELGATAIDLYTQTKAVNIAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-62 44
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 6e-64 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 6e-64 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 6e-64 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-63 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-61 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROP_22240 YP_002779416.1 aldehyde dehydrogenase VFG0082 Protein 3e-61 41