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Name : thiC (ROP_18970) Accession : YP_002779089.1 Strain : Rhodococcus opacus B4 Genome accession: NC_012522 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 2011123 - 2012769 bp Length : 1647 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAGCACAGACATATCTACAGCCACGTCCGTCACCACGGGACCGATCCAGGGCAGCACCAAGCAGTACCTGCAGTCGGG CGACGACATCCGCGTCCCGGTCCGGCGCGTCGACCTCACCAACGGTGAGCACCTCGACGTGTACGACACGTCGGGTCCGT ACACCGACGCGGACGCCACGATCGACCTCGACGCGGGGCTTCCGCATCTGCGTGCGCCGTGGATCGCCGACCGGGCAGAC ACCCAGCTCGACGCCGCCCGTGCCGGAATCGTCACCCCCGAGATGCGGTATTGCGCTGCACGAGAGGGCGTTTCGCCTGA GACAGTGCGCGTCGAGGTCGCGGCGGGTCGCGCCGTGATCCCGGCCAACCGCTGCCACCCCGAACTCGAGCCGATGATCA TCGGCAAGGCGTTCGCGGTCAAGATCAACGCGAACATCGGCAACAGCGCGGTGACGTCGTCGATCGCGGAAGAGGTCGAG AAGATGGTGTGGGCGACCCGGTGGGGCGCGGACACCATCATGGACCTCTCCACCGGCAAGAACATTCACGAGACCCGGGA ATGGATCCTGCGCAATTCGCCGGTGCCCGTGGGGACGGTGCCGATTTATCAGGCGCTCGAGAAGGTGAACGGAGATCCGA CGGCACTGACGTGGGAGATCTACCGCGACACCGTGATCGAGCAGTGCGAGCAGGGTGTCGACTACATGACGGTCCACGCC GGGGTGCTGCTCCGCTACATCCCGCTGACCGCGAAACGCGTGACCGGCATCGTCTCGCGCGGCGGTTCGATCATGGCGGC ATGGTGTCTGGCCCATCACCGGGAATCGTTCCTGTACACCCACTTCGACGAACTCTGCGAAATCCTCCACCGCTACGACG TCACGTTCTCGCTCGGCGACGGACTCCGTCCCGGGTCCATCGCGGACGCCAACGACGAGGCCCAGTTCGCGGAACTCCGT ACCCTCGGGAAGCTCACGAAGATCGCGAAATCGCATGGCGTGCAGGTGATGATCGAAGGTCCCGGGCACGTACCGATGCA CAAGATCGTCGAGAACGTGCGGCTCGAGGAGGAGCTGTGCGAGGAGGCGCCGTTCTACACGCTCGGACCGCTCGCCACCG ACATCGCACCGGCGTACGACCACATCACGTCCGCGATCGGGGCGGCGATGATCGCGCAGGCCGGCACCGCGATGCTCTGC TACGTCACTCCCAAGGAGCACCTGGGGCTGCCGAACCGCGACGACGTCAAGATCGGCGTGATCACGTACAAGATCGCGGC GCACGCCGCGGACCTCGCGAAGCAGCATCCGCGGGCGCAGGAACGGGACGACGCGCTGTCGAAGGCCCGGTTCGAGTTCC GCTGGCACGACCAGTTCGCGCTGTCCCTCGACCCGGATACGGCGCGGGAGTTCCACGACGAAACCCTGCCCGCGGAGCCG GCGAAGACGGCCCACTTCTGCTCGATGTGCGGCCCGAAGTTCTGTTCCATGCGGATCTCCGCCGATGTCCGCGAGTACGC GCAGAAGCACGGCCTCGACTCCATCGAAGCCATCGAGGCGGGCATGGCCGAGAAGTCCAGCGAGTTCGTCGACGCAGGTG GCCGCGTGTATCTGCCCCTCGAATCCGTCACCTCAGAGAATCGGTAA Protein sequence : MSTDISTATSVTTGPIQGSTKQYLQSGDDIRVPVRRVDLTNGEHLDVYDTSGPYTDADATIDLDAGLPHLRAPWIADRAD TQLDAARAGIVTPEMRYCAAREGVSPETVRVEVAAGRAVIPANRCHPELEPMIIGKAFAVKINANIGNSAVTSSIAEEVE KMVWATRWGADTIMDLSTGKNIHETREWILRNSPVPVGTVPIYQALEKVNGDPTALTWEIYRDTVIEQCEQGVDYMTVHA GVLLRYIPLTAKRVTGIVSRGGSIMAAWCLAHHRESFLYTHFDELCEILHRYDVTFSLGDGLRPGSIADANDEAQFAELR TLGKLTKIAKSHGVQVMIEGPGHVPMHKIVENVRLEEELCEEAPFYTLGPLATDIAPAYDHITSAIGAAMIAQAGTAMLC YVTPKEHLGLPNRDDVKIGVITYKIAAHAADLAKQHPRAQERDDALSKARFEFRWHDQFALSLDPDTAREFHDETLPAEP AKTAHFCSMCGPKFCSMRISADVREYAQKHGLDSIEAIEAGMAEKSSEFVDAGGRVYLPLESVTSENR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 1e-164 | 62 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 1e-164 | 62 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 1e-158 | 60 |
