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Name : ROP_01170 (ROP_01170) Accession : YP_002777309.1 Strain : Rhodococcus opacus B4 Genome accession: NC_012522 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 103043 - 105289 bp Length : 2247 bp Strand : - Note : - DNA sequence : TTGAGGTCCGGCTTCACCACGCGAGCGCTGGAGGCGCTGGACTGGGCGCAGGCGCAGAGCATTCCGGTCGCGACACGCCC AGAGCACGTGCTGATGGCGTTGCTGGATCAGGACGCCACCATCGTCGAACCAGTGTTTGAAGCATTGGGTGTGGACGCAG ATGACCTGCGGAGGTCCTCGCCCAGCGTCACGGTCCGGCGGGGCGCTGCCGCCTCCGCGGCCGCGCCCGGGATCGACGCC GACATGGCGTCCCTGCTTCGCGCCGCTGAACATGAGGCGCGTCAGTTGAGTGATCACCTGGTTTCCATCGAGCATCTGCT CATCGCACTCGCGGGCCGCCGCGACGGCGTCGGGGAGGCGCTGCGAGCCGCTGGTGCGGACAGGAGCTCGATGTTGGAGG CCGTGCGCCGCGTGCGTGGACCTGCAGCAGTCGTGGACGCGGAGCCTGAACGCACCTATCTGGGCGTCAGGTGGCGTCCG CCTGCGGTGTCGAGCCAGGTCCTTCGGTACAGCCGAGACCTCACCGAGCTCGCCTTCCGGGCCGAGCTGGACCCGGTGGT CGGCCGCGATGCCGAGATCGAACGCGTCATTCAGGTCCTGTCCCGGCGCAGGAAGAACAATCCCGTCCTTATCGGCGACC CCGGTGTGGGCAAGACCGCGATCGCCGAAGGTCTGGCGCAGCGAATCGTGGCCGGCGATGTCCCTGCGGCGCTGCTGAAC CGGAGGGTGATCGCGCTCGACGTCGGCGCTCTGGTGGCAGGGGCCACGTATCGCGGTGAGTTCGAGGACCGCGTCAAGTC CCTCCTGAAGGACGTGGTGGGCGCCGACGGCGGAATCATCGTCTTCATCGACGAGCTGCACACGATCGTCGGCGCGGGCG CGGCCGAAGGCGCTGTCGACGCCGGGAACCTCTTGAAGCCGATGCTGGCCCGGGGCGAGTTCAGAACGCTGGGCGCGACC ACCCTGGATGAGTATCGGAAGCATGTCGAATCCGATGGTGCGCTCGAGCGCCGCTTTCAGCCGGTCCGGGTCGACGAACC ATCCTCCGCGAACGCGCTCGAGATGCTCCGAGGTCTCCGCAGCAGATACGAAAGCCACCACGGCGTGGCCATCACAGACG CTGCATTGTCCGCCGCGGTATCACTCAGCGACCGCTACATCGCTGATCGGTTCCTACCGGACAAAGCGATCGACCTGATC GACGAGGCCTGCTCGCGGCGCCGCATCCAGAGCGATTCGCTGTCATCCGTCACGCGCGGGGCCGGCTCGTGCACGCCGCC GCTGGTCGATGACGACGACATCGCGCGCCTCGTCGGGCAATGGACGGGGATCCCGGTCTCACGGCTGCAGGAGGAAGAGC TCGAGCGGCTGGTGCACATGGAACACCGCCTCGCAGAACGTGTCGTCGGTCAGGCCAAGGCGGTCGTCGGCGTCTCGGCG GCACTGAGGAACTCTCGCACTGGCCTGTCGGATCCCAACCGGCCCATCGCGTCGCTGATGTTCTGTGGTCCTCTGGGAGT GGGGAAGACGTACCTTGCCCGCGTACTGGCAGACGTCATGCTCGACAGCGGCGAGGCACTCGTCCAGCTCGACATGTCCG ACTACGCCGAGAAGCATTCCGTCACGCGACTCGTCGGCGCCTCTCCGGGATACGTCGGATACGAAGAAGGTGGACAGCTG ACCGATGCCGTCCGCCGCCGCCCATACTGCGTCGTCCTGCTCGACGACATCGAACAGGCGCACCCGGATGTTCACGGCTT GCTTCGCCAGGTGATCGACGACGGGTCTCTGACCGACGGTCAAGGCCGCGTGGTGAGCTTCCGCCATGTGATCCTTGTCA TGACCTCGAGCCTGCCCGATCTGGGTGCCGTCAACCAGCATTTTCGCGCCGAATTCTTGACTCGACTCGACGATGTGCTC GAGTTCGCACCTCTCCGCCGGAAGGATCTCGAGCAGCTCGTCGACATTCAGGTTCGATCCGTTGCCGCCCGGCTGTCGGA TCGCGGCATCGCACTCGAACTCACCCACGAGGCACGGGCGTTGATCGCCGAGCTGGGCGACGACTCCCGCCAGGGTGCGC GGCCACTCGTGCGCGTCGTGCAGAAGGAGTTGATCTCCGCAGTCTCCCGCAGCATCCTCCTCGGCGATGCCTGCCCCGGG GACACGATTCGCGTCGACCAAGAGGGGACGTCGGTCACGCTTACTGTGCTCTCACGTCCCGCCGAGGCTGTGCCCCAACT CAGCTGA Protein sequence : MRSGFTTRALEALDWAQAQSIPVATRPEHVLMALLDQDATIVEPVFEALGVDADDLRRSSPSVTVRRGAAASAAAPGIDA DMASLLRAAEHEARQLSDHLVSIEHLLIALAGRRDGVGEALRAAGADRSSMLEAVRRVRGPAAVVDAEPERTYLGVRWRP PAVSSQVLRYSRDLTELAFRAELDPVVGRDAEIERVIQVLSRRRKNNPVLIGDPGVGKTAIAEGLAQRIVAGDVPAALLN RRVIALDVGALVAGATYRGEFEDRVKSLLKDVVGADGGIIVFIDELHTIVGAGAAEGAVDAGNLLKPMLARGEFRTLGAT TLDEYRKHVESDGALERRFQPVRVDEPSSANALEMLRGLRSRYESHHGVAITDAALSAAVSLSDRYIADRFLPDKAIDLI DEACSRRRIQSDSLSSVTRGAGSCTPPLVDDDDIARLVGQWTGIPVSRLQEEELERLVHMEHRLAERVVGQAKAVVGVSA ALRNSRTGLSDPNRPIASLMFCGPLGVGKTYLARVLADVMLDSGEALVQLDMSDYAEKHSVTRLVGASPGYVGYEEGGQL TDAVRRRPYCVVLLDDIEQAHPDVHGLLRQVIDDGSLTDGQGRVVSFRHVILVMTSSLPDLGAVNQHFRAEFLTRLDDVL EFAPLRRKDLEQLVDIQVRSVAARLSDRGIALELTHEARALIAELGDDSRQGARPLVRVVQKELISAVSRSILLGDACPG DTIRVDQEGTSVTLTVLSRPAEAVPQLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 8e-131 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ROP_01170 | YP_002777309.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 7e-122 | 46 |
| ROP_01170 | YP_002777309.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 7e-131 | 43 |
