Gene Information

Name : ROP_pROB01-00470 (ROP_pROB01-00470)
Accession : YP_002776398.1
Strain :
Genome accession: NC_012520
Putative virulence/resistance : Unknown
Product : putative transposase orfB for insertion sequence element
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 56419 - 57150 bp
Length : 732 bp
Strand : -
Note : fragment

DNA sequence :
GTGGAGTTCGTCGCTGCTCACCGCGACGAACACGGAGTCGATCCGATCTGCGCGGTCTTGCGCGGTACGGCCGCCCAGAT
CGCTCCGTCCACGGTCCGAGCTCACCTGAGCCCCCAGCGAACCGAATCGGCACGTGCGGTGCGTGACCGCGAGGTTCTGT
CCCGGATCCGGGGTGTTCATGCCGACAATCTCGGGGTGTACGGGGCCCGCAAAGTGCACGCCAGTCTGAAACGAGAAGGG
ATGTCAGTGGCCCGGTGCACCGTGGAACGATTGATGAAAGCCGATGGGTTACGGGGAATATTACGGTTGAAAGGGCGGAA
GACCACGCACGCTGACGGGGCCGAGACTCCGCGGCCGGCGGATCGGGTCCAGCGGCAGTTCGTCGCCGACGCGCCCAACA
CGTTGTGGGTGGCGGACCTGACCTACATTCGCACTCATTCGGGGTGGGTGTACGCCGCGTTCATCCTCGACGTGTTCTCC
CGGATGATCGTCGGTTGGCAGGTTTCGACGTCGATGCGTACCGACCTGGCCCTCGACGCCTTGGATATGGGGTTGTGGGC
TCGCCGACGGGTCGGCCAGGACGTCGCCGGATTGATTCACCATAGCGACCGCGGCGTGCAGGGCGGATTCAACCGGTCGT
CGCAACACCGTGCCGTGAGGACGAGTGTACCTGTTCGGCAAACACTTCCGCTGGAGTTCTCCAACCGTGCACTTTTCGGG
GGCGGTTGTTGA

Protein sequence :
MEFVAAHRDEHGVDPICAVLRGTAAQIAPSTVRAHLSPQRTESARAVRDREVLSRIRGVHADNLGVYGARKVHASLKREG
MSVARCTVERLMKADGLRGILRLKGRKTTHADGAETPRPADRVQRQFVADAPNTLWVADLTYIRTHSGWVYAAFILDVFS
RMIVGWQVSTSMRTDLALDALDMGLWARRRVGQDVAGLIHHSDRGVQGGFNRSSQHRAVRTSVPVRQTLPLEFSNRALFG
GGC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 1e-35 47
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 1e-35 47
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 2e-35 47
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 1e-35 47
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 7e-36 46
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 7e-38 46
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 3e-36 46
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 5e-36 46
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 4e-36 46
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 4e-35 46
Z1198 NP_286733.1 transposase Not tested TAI Protein 3e-35 46
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 1e-35 46
Z1638 NP_287141.1 transposase Not tested TAI Protein 3e-35 46
Z1221 NP_286756.1 transposase Not tested TAI Protein 3e-35 46
CDC7B_2035 YP_005163476.1 transposase-like protein Not tested Not named Protein 5e-37 45
CDHC03_0163 YP_005137212.1 transposase-like protein Not tested Not named Protein 1e-25 42