Gene Information

Name : ROP_pROB01-04660 (ROP_pROB01-04660)
Accession : YP_002776817.1
Strain :
Genome accession: NC_012520
Putative virulence/resistance : Unknown
Product : putative transposase orfB for insertion sequence element
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 442768 - 443730 bp
Length : 963 bp
Strand : -
Note : -

DNA sequence :
GTGGAGTTCGTCGCTGCTCACCGCGACGAACACGGAGTCGATCCGATCTGCGCGGTCTTGCGCGGTACGGCCGCCCAGAT
CGCTCCGTCCACGGTCCGAGCTCACCTGAGCCCCCAGCGAACCGAATCGGCACGTGCGGTGCGTGACCGCGAGGTTCTGT
CCCGGATCCGGGGTGTTCATGCCGACAATCTCGGGGTGTACGGGGCCCGCAAAGTGCACGCCAGTCTGAAACGAGAAGGG
ATGTCAGTGGCCCGGTGCACCGTGGAACGATTGATGAAAGCCGATGGGTTACGGGGAATATTACGGTTGAAAGGGCGGAA
GACCACGCACGCTGACGGGGCCGAGACTCCGCGGCCGGCGGATCGGGTCCAGCGGCAGTTCGTCGCCGACGCGCCCAACA
CGTTGTGGGTGGCGGACCTGACCTACATTCGCACTCATTCGGGGTGGGTGTACGCCGCGTTCATCCTCGACGTGTTCTCC
CGGATGATCGTCGGTTGGCAGGTTTCGACGTCGATGCGTACCGACCTGGCCCTCGACGCCTTGGATATGGGGTTGTGGGC
TCGCCGACGGGTCGGCCAGGACGTCGCCGGATTGATTCACCATAGCGACCGCGGCGTGCAGTATCGAGCGGTGCGATACA
CCGAGCGCCTCGACGAGTGTGACGCAGTGTCTTCTGTTGGTTCCAAGGGAGATTCGTATGACAACGCGATGGCGGAGGCG
TTCAACTCGTTGTTCAAGGCCGAGTGCATTCGCAATCCCGTGATGCGCCCGCACGGGGGCTGGCGAGGCCTTGGAGACGT
CGAGTGGGCGGTCGCCGAGTACATCGACTGGTTCAATCACCGCCGCTTGCACGGCGAGATCGACCACGTCCCACCCGCAG
AGTACGAGACCGCCTACTGGTCGAATCACACGGCGGCCGACTACCGTGAGACACCGGTCCTCGCTGAGGCCGGAACCAGA
TAG

Protein sequence :
MEFVAAHRDEHGVDPICAVLRGTAAQIAPSTVRAHLSPQRTESARAVRDREVLSRIRGVHADNLGVYGARKVHASLKREG
MSVARCTVERLMKADGLRGILRLKGRKTTHADGAETPRPADRVQRQFVADAPNTLWVADLTYIRTHSGWVYAAFILDVFS
RMIVGWQVSTSMRTDLALDALDMGLWARRRVGQDVAGLIHHSDRGVQYRAVRYTERLDECDAVSSVGSKGDSYDNAMAEA
FNSLFKAECIRNPVMRPHGGWRGLGDVEWAVAEYIDWFNHRRLHGEIDHVPPAEYETAYWSNHTAADYRETPVLAEAGTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 3e-50 51
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 4e-54 47
Z1221 NP_286756.1 transposase Not tested TAI Protein 2e-54 47
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 2e-53 47
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 2e-54 47
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 5e-54 47
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 4e-54 47
Z1198 NP_286733.1 transposase Not tested TAI Protein 3e-54 47
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 3e-53 47
Z1638 NP_287141.1 transposase Not tested TAI Protein 3e-54 47
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 3e-53 47
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 3e-54 47
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 3e-53 47
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-54 47
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 3e-52 47
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 3e-54 47
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 4e-54 47
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 3e-54 47
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 6e-39 46
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 2e-37 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROP_pROB01-04660 YP_002776817.1 putative transposase orfB for insertion sequence element VFG1602 Protein 1e-52 47