Gene Information

Name : ROP_pROB01-04030 (ROP_pROB01-04030)
Accession : YP_002776754.1
Strain :
Genome accession: NC_012520
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 379673 - 381172 bp
Length : 1500 bp
Strand : -
Note : -

DNA sequence : 
ATGACCATGATGTCGGTGGACATACCCGAGGCGGTGCAGTCTTTCTTGCGCAGCGCTTCCGCGAGCATCGTGATCGGGAC
AGAGAAGTTGGCGGCAGCGGACGGCAGTGAGGTTCCCACCACGGACCCGGCGACTGGCGCAGTCCTGGCCAACATTTCGG
CGGGCGGCGCGATCGACGTGGATCGGGCCGTCGACTCCGCAAGTGTGGCCTTCCAGGCCTGGCGCCGCCTGAGCCCCGCC
GCTCGAGGTCGGATATTGCTCGACGTCGCGGACGCGATCGAGGCGCACGCGGAGGAACTGGCCACTCTCGAGACCCTCGA
CAACGGCAAGCCGCTGTCGGAGTCGTTGTATATCGACGTGAGCCTGGCCAGCCAAATCTGGCGATATTTCGGTGGGTGGA
CAACGAAACTCGCCGGCCGGACTCTGCCGGTTTCACCGGCGGTAGGAGAGGCACTGGTCTACACACAACGAGAACCGCTG
GGGGTGATCGGCGCGATCGCGCCGTGGAACTTTCCGTTACTGATCGCTTCCTGGAAGGTGGCCCCCGCGCTGGCGGCAGG
CAACACCGTAGTCCTCAAGCCGTCCGAACATACCTCGCTGAGCGCGCTCCGACTGACCGAAATCGCACTCGAGGCCGGAC
TGCCCCCCGGAGTCCTCAACCTGGTCACCGGGTTCGGCCCGGAGGCGGGCCAAGCCCTGATTGATCATCCTAAGGTTGCG
AAGGTCTCGTTTACCGGATCGACCGAAACGGGGCGCAGGATCATCACCGCCAGCGCGCCGAGCATCAAGAAGCTCACCCT
CGAGCTGGGTGGAAAGTCCGCAAACATCGTCTTCCCGGATGCCGATCTCAACGCCGCGGCACAGGGCGCATTAGCCGCCA
TCTTCCTCAACCAGGGACAGGTGTGTTGTGCAGGTTCCCGGCTCTTTGTCCACCGCGACGTCCACGACGAACTCGTAGCC
GAGCTGGAGGCGGCCACCCGAGCGATTCAGCTCGGTCATGGGTTGGACGAGAGTACCGAGATGGGCCCATTGGTCTCCGC
GATGCAGCTGGACCGCGTCGAGGGCTTCGTACGCGCGGGCACCCGGGAGGGCGCCACCCTCGTCTGTGGTGGTGAGTATC
CGGGGGGCGCGCTCAGTAACGGGCACTTCCTCACACCAACGATTTTCACCGATGTGCGTGACGACATGTCGATCGCCACG
GAGGAGATCTTCGGGCCGGTGCTGTCGGTGCTGACCTTCGACGACGAAGCGGAAGTGGTGCGCCGCGCCAACTCCAGTGC
CTATGGACTCGCAGCAGGTGTGTGGACCGATAACCTCAAGCGGGCGCACCGGGTGGCGCGGGAGCTCGAGGCGGGCACCG
TCTGGGTCAACATGTACAACATGCTCGATCCCGCGGCGCCGTTCGGTGGCTACAAAGCATCGGGGTACGGGCGAGACCTC
GGCGAGGAATCCTTGCTGGGATACACGCAGACCAAATCCGTTTGGATCAGCCTGGACTGA

Protein sequence : 
MTMMSVDIPEAVQSFLRSASASIVIGTEKLAAADGSEVPTTDPATGAVLANISAGGAIDVDRAVDSASVAFQAWRRLSPA
ARGRILLDVADAIEAHAEELATLETLDNGKPLSESLYIDVSLASQIWRYFGGWTTKLAGRTLPVSPAVGEALVYTQREPL
GVIGAIAPWNFPLLIASWKVAPALAAGNTVVLKPSEHTSLSALRLTEIALEAGLPPGVLNLVTGFGPEAGQALIDHPKVA
KVSFTGSTETGRRIITASAPSIKKLTLELGGKSANIVFPDADLNAAAQGALAAIFLNQGQVCCAGSRLFVHRDVHDELVA
ELEAATRAIQLGHGLDESTEMGPLVSAMQLDRVEGFVRAGTREGATLVCGGEYPGGALSNGHFLTPTIFTDVRDDMSIAT
EEIFGPVLSVLTFDDEAEVVRRANSSAYGLAAGVWTDNLKRAHRVARELEAGTVWVNMYNMLDPAAPFGGYKASGYGRDL
GEESLLGYTQTKSVWISLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 6e-80 47
hpaE AAO17179.1 HpaE Not tested tcd island Protein 1e-76 44
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 1e-78 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-76 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-76 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-76 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-76 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-76 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROP_pROB01-04030 YP_002776754.1 aldehyde dehydrogenase VFG0082 Protein 2e-76 42