Gene Information

Name : BBR47_05870 (BBR47_05870)
Accession : YP_002770068.1
Strain : Brevibacillus brevis NBRC 100599
Genome accession: NC_012491
Putative virulence/resistance : Resistance
Product : ligase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1181
EC number : -
Position : 607675 - 608727 bp
Length : 1053 bp
Strand : +
Note : -

DNA sequence :
ATGAAGAAATTGACTGTCGCGATATTGTTTGGGGGATGTTCCTCTGAGTATGAAGTATCGCTAAAATCTACGAGTTCTGT
GCTGGAGAGCTTGTGTCTGGAAAAGTACGAGGTGATTTTGCTAGGAATTACGAGAGAAGGGCAATGGCTGCGATATACCG
GCAACATCGAAAGCATTCGGAATGACAGTTGGCATCAAAGTGAGAAGTGTGTGCCTGCCTTTCTCTCTCCTTGCAGACAG
GTGCGGGGAATTGTTACACAGGAGAACGGTGCCATGACGGTCACGAAGGTTGATGTGGTATTCCCGATTTTGCATGGCAA
AAACGGAGAGGATGGAACAGTGCAAGGGCTATTGGAGCTCGCCGGAATTCCTTTTGTCGGTTGTCACACGCTATCCTCTG
CGATTTGTATGGATAAGGATATCGCCCACACGTTGGCGGAGGGCTCCGGTATCAAAACGCCAAGATCCGTTGCCGTTTAT
CCAAATACGGATCTGGCAACTGTTCAAGCTGCCACCGAACCACTGGGATTTCCTTTGTATGTCAAACCGGCAAAGGCAGG
GTCCTCCATTGGGATTACGAAAGCATACAGCCTATCAGAATTGTTTTTCGGGATAGAAAACGCCCTCCAGCATGATGACA
AGGTAGTCATCGAGGAAAACATCACAGGATTTGAGGTGGGCTGCGCGGTACTGGGAAATCGTGAGGTCATTGTGGGGGAA
GTGGATGAGATCGAATTGCTCCAAGGTTTCTTCGATTATACTGAAAAGTATTCATTGGAGACTGCCCATATCCATGTCCC
AGCAAGAATTGACGAAGAGCTCGCTCATAAAATCAAGCAAACAGCGACCCATCTTTATCAGGTTTTTGGCTGTCGTGGAT
TCGCTCGCGTGGATATGTTTGTCACACCAGACGGGGATATCGTGTTTAACGAAGTGAATACAATCCCCGGCTTTACCTCG
AAGAGCAGGTATCCAAGCATGCTGCGTGCTGCGGGGATTTCCTATAAGGAGCTTCTTGATACGTTGATCATGCTAGCGTT
GGAGGAGGACTAA

Protein sequence :
MKKLTVAILFGGCSSEYEVSLKSTSSVLESLCLEKYEVILLGITREGQWLRYTGNIESIRNDSWHQSEKCVPAFLSPCRQ
VRGIVTQENGAMTVTKVDVVFPILHGKNGEDGTVQGLLELAGIPFVGCHTLSSAICMDKDIAHTLAEGSGIKTPRSVAVY
PNTDLATVQAATEPLGFPLYVKPAKAGSSIGITKAYSLSELFFGIENALQHDDKVVIEENITGFEVGCAVLGNREVIVGE
VDEIELLQGFFDYTEKYSLETAHIHVPARIDEELAHKIKQTATHLYQVFGCRGFARVDMFVTPDGDIVFNEVNTIPGFTS
KSRYPSMLRAAGISYKELLDTLIMLALEED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanB NP_815951.1 D-alanine--D-lactate ligase Not tested Not named Protein 8e-64 45
vanB YP_008394259.1 Vancomycin B-type resistance protein vanB, D-alanine--D-lactate ligase Not tested Not named Protein 3e-64 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BBR47_05870 YP_002770068.1 ligase AF277571.gene.p01 Protein 2e-65 46
BBR47_05870 YP_002770068.1 ligase NC_014475.1.orf3.gen Protein 9e-66 46
BBR47_05870 YP_002770068.1 ligase NC_005054.2598280.p0 Protein 9e-66 46
BBR47_05870 YP_002770068.1 ligase U35369.1.gene6.p01 Protein 4e-64 45
BBR47_05870 YP_002770068.1 ligase AE016830.1.gene2250. Protein 4e-64 45
BBR47_05870 YP_002770068.1 ligase U00456.gene.p01 Protein 4e-64 45
BBR47_05870 YP_002770068.1 ligase AF310956.2.orf5.gene Protein 8e-65 45
BBR47_05870 YP_002770068.1 ligase AY145441.gene.p01 Protein 4e-65 45
BBR47_05870 YP_002770068.1 ligase AY489045.gene.p01 Protein 3e-62 45
BBR47_05870 YP_002770068.1 ligase AF130997.1.orf4.gene Protein 2e-62 45
BBR47_05870 YP_002770068.1 ligase AF162694.gene.p01 Protein 3e-66 43
BBR47_05870 YP_002770068.1 ligase L29638.gene.p01 Protein 3e-62 42