Gene Information

Name : kdpB (BBR47_03830)
Accession : YP_002769864.1
Strain : Brevibacillus brevis NBRC 100599
Genome accession: NC_012491
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase B chain
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : 3.6.3.12
Position : 391412 - 393451 bp
Length : 2040 bp
Strand : +
Note : -

DNA sequence :
ATGAGTAGAACGCGCACGGTTGCGCTTCCTAAAGATTTGTATCAACGGGCCTTTGTCGAGTCCTTCAAAAAACTGGACCC
GCGTGTGATGATGAAAAATCCAGTCATGTTCGTGGTAGAGATCGGGTTCTTCATTACGCTTCTCCTGACGTTTGTGCCGA
ATTTGTTTGGGGGAGCTTCGGACCCGTTTTACAACGGCGTCGTCAGCTTGATCCTGTTCGTGACGATTTTGTTCGCGAAC
TTCGCAGAAGCCTTGGCAGAAGGGCGCGGCAAAGCACAGGCAGAGAGCTTGAAAAAAACGAAGCAGGACACGCAAGCAAA
AAAAGTGGGGAAAGATGGTCGCGTGCAAGTCGTCAGTTCCACAGAACTGCGAAAGGGCGATCTGGTCATCGTGGAAGCAG
GCGAGCTGATTCCATCCGACGGGGAAATCGTCGAGGGTGTCGCCTCTGTGGACGAATCAGCGATTACAGGTGAATCCGCC
CCGGTCATTAAAGAAGCAGGTGGCGATTTTAGCTCTGTCACGGGAGGCACACGTGTCGTCAGTGACCGCATCCGTGTCCG
GGTGACGACTGATCCCGGCGAATCGTTTTTGGATCGCATGATTTCGTTGGTGGAAGGAGCGAAGAGACAGAAGACTCCGA
ATGAAATTGCGTTGAATACGCTGTTGGTCAGCTTAACGTTAATTTTCTTGATCGTTTGCACGACTTTGCTGCCGATAGCC
AACTATGTACATGCAGCCATTCCGGTTGCGACACTGATTGCTTTGCTCGTTTGCTTGATTCCAACCACGATTGGCGGACT
CTTGTCAGCGATTGGGATTGCAGGTATGGACCGGGTCACACAGTTTAACGTCATCGCCATGTCGGGTAAAGCGGTTGAGG
CGTCTGGTGACATCAACACTATTATTTTGGATAAAACGGGAACGATCACGCATGGTAACCGGATGGCTGCCGAGTTTGTC
ACCGTAGGCAACACCAAAAGCACGGAATTGAACCGAGTAGCTGCACAAAGCTCAGTCCATGACGAAACACCGGAAGGACG
CTCTGTTGTAGAGCTGGCGAAAAAACAAGGTCTGGCACCTGCTGAACTGGAATTGCCCGGTTCCGAAGGCGTGGAGTTCC
GCGCTGAAACAAGAATGAGCGGGACGAATCTGGCAAACGGGGTCATCATCCGTAAAGGAGCCGTCGACGCCATCAAGAAA
TACGTGGCAGAGCAAGGGGGCAACATCCCTGCTGATTTGGATGAAAAAGCAAACCGGATTGCAACGGCGGGCGGCACGCC
ATTGGCTGTAGTAGAAGGCAATACGATTCTCGGTTTGATTTACTTGAAGGATACCGTAAAGCCAGGGATGCGCGAACGCT
TTGAAGAGCTGCGCCGGATGGGGATTCGTACGGTCATGTGTACGGGAGATAACCCGCTGACAGCAGCGACGATTGCCCGC
GAAGCTGGTGTAGATGATTTCGTAGCGGAAGCCAAGCCGGAAGACAAGATTGCGCTGATCCGCAAAGAACAAGCGGCAGG
CAAGCTGGTCGCCATGACAGGTGATGGTACGAATGACGCGCCAGCTCTCGCACAAGCCGATGTTGGTCTGGCGATGAATA
CAGGAACGGTAGCGGCGAAGGAAGCAGCGAACATGGTCGACTTGGATTCTGACCCGACCAAAATCATCGAGGTCGTTGCG
ATTGGCAAGCAGCTTTTGATGACACGCGGTGCATTGACGACGTTCAGTATCGCCAATGACGTAGCGAAATACTTCGCGAT
CATTCCTGCGATGTTCATGCTGGCGATCCCGCAAATGAGTGCACTCAACATTATGGGCTTGGCTACACCGCAAAGTGCGA
TTTTGTCCGCGTTGATCTTCAATGCGATCATTATTCCGATCCTGATTCCGTTGGCGATGAAAGGTGTGAAATACACGCCG
ATGAGCGCGACAAAGCTGCTTAGCCGCAACCTGGTGATCTATGGCTTGGGAGGAATTATCGTTCCGTTCGTGGGCATCAA
GCTGATTGACTTGATTTTGAGTGGATTGAATTTAATTTAA

Protein sequence :
MSRTRTVALPKDLYQRAFVESFKKLDPRVMMKNPVMFVVEIGFFITLLLTFVPNLFGGASDPFYNGVVSLILFVTILFAN
FAEALAEGRGKAQAESLKKTKQDTQAKKVGKDGRVQVVSSTELRKGDLVIVEAGELIPSDGEIVEGVASVDESAITGESA
PVIKEAGGDFSSVTGGTRVVSDRIRVRVTTDPGESFLDRMISLVEGAKRQKTPNEIALNTLLVSLTLIFLIVCTTLLPIA
NYVHAAIPVATLIALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIAMSGKAVEASGDINTIILDKTGTITHGNRMAAEFV
TVGNTKSTELNRVAAQSSVHDETPEGRSVVELAKKQGLAPAELELPGSEGVEFRAETRMSGTNLANGVIIRKGAVDAIKK
YVAEQGGNIPADLDEKANRIATAGGTPLAVVEGNTILGLIYLKDTVKPGMRERFEELRRMGIRTVMCTGDNPLTAATIAR
EAGVDDFVAEAKPEDKIALIRKEQAAGKLVAMTGDGTNDAPALAQADVGLAMNTGTVAAKEAANMVDLDSDPTKIIEVVA
IGKQLLMTRGALTTFSIANDVAKYFAIIPAMFMLAIPQMSALNIMGLATPQSAILSALIFNAIIIPILIPLAMKGVKYTP
MSATKLLSRNLVIYGLGGIIVPFVGIKLIDLILSGLNLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 8e-173 62
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 4e-172 61
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 5e-172 61
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 5e-172 61
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 5e-172 61
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 5e-172 61
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-165 58
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 1e-165 58