Gene Information

Name : pdxS (BBR47_00160)
Accession : YP_002769497.1
Strain : Brevibacillus brevis NBRC 100599
Genome accession: NC_012491
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 30579 - 31463 bp
Length : 885 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGGTACAAGTAGGAACGTCCCGCGTTAAAAGAGGTATGGCTGAAATGCAAAAAGGCGGCGTCATTATGGACGTCGTGAA
TGCTGAACAAGCGAAAATTGCAGAAGCAGCGGGTGCTGTTGCTGTAATGGCTTTGGAGCGTGTACCGTCTGACATTCGTG
CAGCTGGTGGAGTTGCGCGTATGGCTGACCTTAGCATTGTAGAGGAAGTACTGAATGCTGTTTCGATCCCTGTTATGGCA
AAAGCTCGTATCGGTCATTTTGTTGAAGCGCGTGTTCTCGAATCTCTGGGTGTAGATTATCTCGATGAGAGTGAAGTGCT
CACTCCGGCAGATGACTTGTACCATATCAATAAAAAAGAGTTCACTGTACCGTTTGTATGTGGCGCCCGTGATCTGGGTG
AAGCCCTCCGCCGTATTGGGGAAGGTGCATCCATGATCCGCACAAAAGGAGAGCCAGGTACCGGAAACATTGTAGAGGCT
GTTCGTCACATGCGCACGATGATGTCCCAAATCCGTAAAGTGCAAGCCATGTCCTACGATGAACTGATGGCGGAAGCCAA
AAACCTGGGTGCCCCATACGAACTGCTTGAAGAGGTACACAAAACAGGTAAGCTGCCAGTTGTAAACTTCGCAGCAGGTG
GAGTAGCAACACCAGCAGATGCTGCCCTGATGATGCAACTCGGTTCCGATGGCGTGTTTGTTGGCTCTGGTATCTTTAAA
TCAGAGAATCCAGAGAAGTTTGCTCGCGCGATCGTGGAAGCGACCACCCACTACACGGATTACGAACTGATTGCTCGCGT
ATCCAAAGGCTTGGGGACGGCAATGCCAGGAATCGAAATCTCCAAAATTCGTGAAGCTGATCGCATGCAAGAGCGCGGCT
GGTAA

Protein sequence :
MVQVGTSRVKRGMAEMQKGGVIMDVVNAEQAKIAEAAGAVAVMALERVPSDIRAAGGVARMADLSIVEEVLNAVSIPVMA
KARIGHFVEARVLESLGVDYLDESEVLTPADDLYHINKKEFTVPFVCGARDLGEALRRIGEGASMIRTKGEPGTGNIVEA
VRHMRTMMSQIRKVQAMSYDELMAEAKNLGAPYELLEEVHKTGKLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFK
SENPEKFARAIVEATTHYTDYELIARVSKGLGTAMPGIEISKIREADRMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-76 67
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-76 66
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-76 66